RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PTPMT1Q8WUK0 201 aaPredicted RBP7.23□□□□□ -1.25
NEK3-207ENST00000617054 RASSF5Q8WWW0 418 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 SLC39A7Q92504 469 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 SENP5Q96HI0 755 aaPredicted RBP7.23□□□□□ -1.25
NEK3-207ENST00000617054 MCHR1Q99705 422 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 ARHGAP9Q9BRR9 750 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 SPATA5L1Q9BVQ7 753 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 PINK1Q9BXM7 581 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 OR10A5Q9H207 317 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 EGLN3Q9H6Z9 239 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 SERTAD3Q9UJW9 196 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 MRPS33Q9Y291 106 aaKnown RBP7.23□□□□□ -1.25
NEK3-207ENST00000617054 CEPT1Q9Y6K0 416 aa7.23□□□□□ -1.25
NEK3-207ENST00000617054 ALPK2Q86TB3 2170 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 CCDC163A0A0D9SF12 145 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 IGHV5-10-1A0A0J9YXX1 117 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 SH3PXD2BA1X283 911 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 AGAP5A6NIR3 686 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 CT45A8P0DMV1 189 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 CT45A9P0DMV2 189 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ANXA8P13928 327 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 C21orf33P30042 268 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 GSTT1P30711 240 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 CNR2P34972 360 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 HLCSP50747 726 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 POU6F2P78424 691 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 EPS8Q12929 822 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 GNA13Q14344 377 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 RAB39AQ14964 217 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 MAD2L1BPQ15013 274 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 NR0B2Q15466 257 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 CT45A2Q5DJT8 189 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ARHGAP40Q5TG30 622 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 GPR107Q5VW38 600 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 PWWP2BQ6NUJ5 590 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 CLVS1Q8IUQ0 354 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 ZNF595Q8IYB9 648 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 SPARTQ8N0X7 666 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 OR6C4Q8NGE1 309 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 GRHL3Q8TE85 626 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 DNAJA3Q96EY1 480 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 FAM46AQ96IP4 442 aaKnown RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 SLC41A2Q96JW4 573 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 HRASLS5Q96KN8 279 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 BTBD2Q9BX70 525 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ITPAQ9BY32 194 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ZNF350Q9GZX5 532 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 RAB33BQ9H082 229 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ARRDC1-AS1Q9H2J1 176 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ARMC7Q9H6L4 198 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ZNF304Q9HCX3 659 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 OCIAD1Q9NX40 245 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 SLC7A7Q9UM01 511 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 HEATR5AQ86XA9 2040 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 A0A087WV62 115 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 FITM1A5D6W6 292 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 INMTO95050 263 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 HOXB6P17509 224 aaKnown RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 HOXA6P31267 233 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 GPR4P46093 362 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ALDH6A1Q02252 535 aaKnown RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 XAF1Q6GPH4 301 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 LCN10Q6JVE6 187 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 TMEM71Q6P5X7 295 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 FAM199XQ6PEV8 388 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 WDR74Q6RFH5 385 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 MAMSTRQ6ZN01 415 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 DTWD2Q8NBA8 298 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 IFI44Q8TCB0 444 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 THAP3Q8WTV1 239 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 CNOT9Q92600 299 aaKnown RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 VSTM2LQ96N03 204 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 GAL3ST4Q96RP7 486 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 USB1Q9BQ65 265 aaKnown RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 PLA2G12AQ9BZM1 189 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 RBM38Q9H0Z9 239 aaKnown RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 POLR2J3Q9H1A7 115 aaKnown RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 SLC22A11Q9NSA0 550 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 ZNF226Q9NYT6 803 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 REV1Q9UBZ9 1251 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 FOXD3Q9UJU5 478 aaPredicted RBP7.22□□□□□ -1.25
NEK3-207ENST00000617054 ZNF232Q9UNY5 417 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 OR10H1Q9Y4A9 318 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 R4GN57 208 aa7.22□□□□□ -1.25
NEK3-207ENST00000617054 DPM1O60762 260 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 FAM20BO75063 409 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 CPNE6O95741 557 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 CH25HO95992 272 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 CDH2P19022 906 aaPredicted RBP7.21□□□□□ -1.25
NEK3-207ENST00000617054 HTR2AP28223 471 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 DGCR6Q14129 220 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 KEAP1Q14145 624 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 LARS2Q15031 903 aaKnown RBP7.21□□□□□ -1.25
NEK3-207ENST00000617054 GARNL3Q5VVW2 1013 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 WDR88Q6ZMY6 472 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 PLEKHM3Q6ZWE6 761 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 ZNF619Q8N2I2 560 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 MORN4Q8NDC4 146 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 ZNF675Q8TD23 568 aa7.21□□□□□ -1.25
NEK3-207ENST00000617054 HDAC2Q92769 488 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms