RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 VNN3Q9NY84 501 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 ABCG2Q9UNQ0 655 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 MAGED1Q9Y5V3 778 aaPredicted RBP12.71□□□□□ -0.37
TMEM254-213ENST00000613758 PEX12O00623 359 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 KIAA0513O60268 411 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 CELA2AP08217 269 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 ICAM2P13598 275 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 ZNF23P17027 643 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 CD247P20963 164 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 FLYWCH1Q4VC44 716 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 ZNF311Q5JNZ3 666 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 C16orf47Q6ZP98 133 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 PIWIL3Q7Z3Z3 882 aaKnown RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 PEX5LQ8IYB4 626 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 PRR22Q8IZ63 422 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 OR52P1PQ8NH57 321 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 ADAMTS17Q8TE56 1095 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 RASSF5Q8WWW0 418 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 C8orf4Q9NR00 106 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 MRTO4Q9UKD2 239 aaKnown RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 WASF3Q9UPY6 502 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 IFT52Q9Y366 437 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 NINQ8N4C6 2090 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 NPIPA5A0A0B4J1W7 369 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 AGAP5A6NIR3 686 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 TMEM200CA6NKL6 621 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 NPIPA7E9PJI5 369 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 MASP2O00187 686 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 REM1O75628 298 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 IL33O95760 270 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 PABPC4LP0CB38 370 aaKnown RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 NPIPA8P0DM63 369 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 KCNJ5P48544 419 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 PPP1R8Q12972 351 aaKnown RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 VASH2Q86V25 355 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 VRK2Q86Y07 508 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 GPR32P1Q8NGA4 272 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 EFHD2Q96C19 240 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 NR1H4Q96RI1 486 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 TRIM45Q9H8W5 580 aaPredicted RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 CACYBPQ9HB71 228 aaKnown RBP12.7□□□□□ -0.38
TMEM254-213ENST00000613758 UBAP1Q9NZ09 502 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 BAG5Q9UL15 447 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 ZNF232Q9UNY5 417 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 PCDHGB5Q9Y5G0 923 aa12.7□□□□□ -0.38
TMEM254-213ENST00000613758 PRAMEF25A6NGN4 478 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 hCG_2039718K7EN88 272 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 WWP2O00308 870 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 FABP3P05413 133 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 KRT20P35900 424 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 PSMD4P55036 377 aaKnown RBP12.69□□□□□ -0.38
TMEM254-213ENST00000613758 NRG3P56975 720 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 PSPHP78330 225 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 ATP1A4Q13733 1029 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 IFI44LQ53G44 452 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 TCTN3Q6NUS6 607 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 HS3ST5Q8IZT8 346 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 SLC34A3Q8N130 599 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 DIO2Q92813 273 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 IP6K3Q96PC2 410 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 OSBPL11Q9BXB4 747 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 MYOTQ9UBF9 498 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 KCNE5Q9UJ90 142 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 EIF4E1BA6NMX2 242 aaKnown RBP12.69□□□□□ -0.38
TMEM254-213ENST00000613758 UGT2B17O75795 530 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 DIRAS1O95057 198 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 DBIP07108 87 aaKnown RBP12.69□□□□□ -0.38
TMEM254-213ENST00000613758 FESP07332 822 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 IL7RP16871 459 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 TNFRSF1BP20333 461 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 ABCD3P28288 659 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 DCTP40126 519 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 Q0VFX4 171 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 GK3PQ14409 553 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 PDK3Q15120 406 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 MAPK14Q16539 360 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 UGT2A3Q6UWM9 527 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 CHERPQ8IWX8 916 aaKnown RBP12.69□□□□□ -0.38
TMEM254-213ENST00000613758 TAGAPQ8N103 731 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 OR5K1Q8NHB7 308 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 MAGEE2Q8TD90 523 aaPredicted RBP12.69□□□□□ -0.38
TMEM254-213ENST00000613758 PROX1Q92786 737 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 OMA1Q96E52 524 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 PINK1Q9BXM7 581 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 SH3GLB1Q9Y371 365 aa12.69□□□□□ -0.38
TMEM254-213ENST00000613758 CENPVL1A0A0U1RR11 272 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 G3V2T6 193 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 GNGT2O14610 69 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 UBTFL6P0CB48 400 aaPredicted RBP12.68□□□□□ -0.38
TMEM254-213ENST00000613758 ITGAMP11215 1152 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 RPS4Y1P22090 263 aaKnown RBP12.68□□□□□ -0.38
TMEM254-213ENST00000613758 PRKAR1BP31321 381 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 OR1E2P47887 323 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 ATP12AP54707 1039 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 CLN3Q13286 438 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 DAG1Q14118 895 aa12.68□□□□□ -0.38
TMEM254-213ENST00000613758 LARS2Q15031 903 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms