RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 LMX1AQ8TE12 382 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 RBM18Q96H35 190 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF582Q96NG8 517 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CD180Q99467 661 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF559Q9BR84 538 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TAPBPLQ9BX59 468 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 TPSD1Q9BZJ3 242 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 FGF20Q9NP95 211 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CTPS2Q9NRF8 586 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 CA14Q9ULX7 337 aa11.12□□□□□ -0.63
USP6NL-206ENST00000609853 LSM2Q9Y333 95 aaKnown RBP11.12□□□□□ -0.63
USP6NL-206ENST00000609853 KNL1Q8NG31 2342 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 KRBA1A5PL33 1030 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 TLCD2A6NGC4 264 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 LMO7DNF2Z398 122 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 MYL12BO14950 172 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 CBX7O95931 251 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 HSMCR30P0CW71 290 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 GALNSP34059 522 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 GABRA3P34903 492 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 STARD6P59095 220 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 STX4Q12846 297 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 MLLT11Q13015 90 aaPredicted RBP11.11□□□□□ -0.63
USP6NL-206ENST00000609853 MINDY4Q4G0A6 757 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 RPL13AP3Q6NVV1 102 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF613Q6PF04 617 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 OGFOD3Q6PK18 319 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 GRAMD2AQ8IUY3 354 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 NKAIN4Q8IVV8 208 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 SLC34A3Q8N130 599 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 CAMKK1Q8N5S9 505 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 FAM160A2Q8N612 972 aaPredicted RBP11.11□□□□□ -0.63
USP6NL-206ENST00000609853 IQCF1Q8N6M8 205 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 SIMC1Q8NDZ2 872 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 MCFD2Q8NI22 146 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 HSPBAP1Q96EW2 488 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
USP6NL-206ENST00000609853 HS6ST2Q96MM7 605 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 NXF2Q9GZY0 626 aaKnown RBP11.11□□□□□ -0.63
USP6NL-206ENST00000609853 ISYNA1Q9NPH2 558 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 STARD5Q9NSY2 213 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 C2orf42Q9NWW7 574 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 CHCHD3Q9NX63 227 aaKnown RBP11.11□□□□□ -0.63
USP6NL-206ENST00000609853 WNT16Q9UBV4 365 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 TMEM5Q9Y2B1 443 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 CDH10Q9Y6N8 788 aa11.11□□□□□ -0.63
USP6NL-206ENST00000609853 SPTBN5Q9NRC6 3674 aaKnown RBP11.11□□□□□ -0.63
USP6NL-206ENST00000609853 KDM4EB2RXH2 506 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-206ENST00000609853 H0YIG0 161 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 AQP9O43315 295 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF749O43361 778 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 CBFA2T3O75081 653 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 MYL12AP19105 171 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 DRD5P21918 477 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 PSMD4P55036 377 aaKnown RBP11.1□□□□□ -0.63
USP6NL-206ENST00000609853 HSD17B7P56937 341 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF155Q12901 538 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-206ENST00000609853 SLC13A2Q13183 592 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 UBXN2BQ14CS0 331 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 MAPK14Q16539 360 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 RGS21Q2M5E4 152 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 CCNJQ5T5M9 372 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 MRPL2Q5T653 305 aaKnown RBP11.1□□□□□ -0.63
USP6NL-206ENST00000609853 ZNF620Q6ZNG0 422 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 ATCAYQ86WG3 371 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 NRMQ8IXM6 262 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 POGLUT1Q8NBL1 392 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 OR52R1Q8NGF1 315 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 CHPT1Q8WUD6 406 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 OIT3Q8WWZ8 545 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 PIK3R3Q92569 461 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 RIT1Q92963 219 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 ZDHHC12Q96GR4 267 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 OR5M11Q96RB7 305 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 MAP3K3Q99759 626 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 PLA2G12AQ9BZM1 189 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 EGLN3Q9H6Z9 239 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 ZBTB20Q9HC78 741 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-206ENST00000609853 PDE7BQ9NP56 450 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 ENAMQ9NRM1 1142 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 SEC14L4Q9UDX3 406 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 SLC7A7Q9UM01 511 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 CFL2Q9Y281 166 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 EXOSC1Q9Y3B2 195 aaKnown RBP11.1□□□□□ -0.63
USP6NL-206ENST00000609853 SLCO1B1Q9Y6L6 691 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 PMF1-BGLAPU3KQ54 211 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 THADAQ6YHU6 1953 aa11.1□□□□□ -0.63
USP6NL-206ENST00000609853 A0A0A6YYC8 382 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-206ENST00000609853 TMEM129A0AVI4 362 aa11.09□□□□□ -0.63
USP6NL-206ENST00000609853 FITM1A5D6W6 292 aa11.09□□□□□ -0.63
USP6NL-206ENST00000609853 ANKRD33BA6NCL7 494 aa11.09□□□□□ -0.63
USP6NL-206ENST00000609853 METTL15A6NJ78 407 aa11.09□□□□□ -0.63
USP6NL-206ENST00000609853 I3L1I5 382 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-206ENST00000609853 TAF4O00268 1085 aa11.09□□□□□ -0.63
USP6NL-206ENST00000609853 ARHGAP33O14559 1287 aa11.09□□□□□ -0.63
USP6NL-206ENST00000609853 HCRTR1O43613 425 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms