RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 BARX2Q9UMQ3 279 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 TMED5Q9Y3A6 229 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 AP1M2Q9Y6Q5 423 aa3.28□□□□□ -1.88
SMCHD1-213ENST00000609587 NCAPD2Q15021 1401 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 POGZQ7Z3K3 1410 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 GRIN2DO15399 1336 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ATP8B3O60423 1300 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 H0YC42 278 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 NOL3O60936 208 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 VPS26AO75436 327 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 GJB5O95377 273 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ALPIP09923 528 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 UMPSP11172 480 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 TOP1P11387 765 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 IDSP22304 550 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 IGFBP5P24593 272 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 RFC4P35249 363 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 MAGEA9P43362 315 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 FNTAP49354 379 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 HSF2Q03933 536 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 CYBRD1Q53TN4 286 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ATAD3CQ5T2N8 411 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 SLX4IPQ5VYV7 408 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 BTNL3Q6UXE8 466 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ZYG11AQ6WRX3 759 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 LRRC43Q8N309 656 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 SPERTQ8NA61 448 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 CCDC110Q8TBZ0 833 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 SELENOMQ8WWX9 145 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ELMO2Q96JJ3 720 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 FICDQ9BVA6 458 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ECT2Q9H8V3 914 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 GLRX2Q9NS18 164 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 C1orf123Q9NWV4 160 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ATP6V1HQ9UI12 483 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 ZNF107Q9UII5 783 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 FOXJ3Q9UPW0 622 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 EXOSC1Q9Y3B2 195 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 NAALAD2Q9Y3Q0 740 aa3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 CHTOPQ9Y3Y2 248 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-213ENST00000609587 A0A0U1RQV5 110 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 WASHC1A8K0Z3 465 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 WASH3PC4AMC7 463 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 F8WDY8 70 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 G3V3Y1 287 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 L7N2F9 121 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 SGK1O00141 431 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 CASKO14936 926 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 SPAG6O75602 509 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 THY1P04216 161 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 IGFBP1P08833 259 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 TSPY4P0CV99 314 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 TSPY10P0CW01 314 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 LAMP1P11279 417 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 PGAM2P15259 253 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 SDC1P18827 310 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 PAICSP22234 425 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 DPP4P27487 766 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 RPS6P62753 249 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 PAX2Q02962 417 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 PDZK1IP1Q13113 114 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 IDI1Q13907 227 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 TFDP1Q14186 410 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 PPP1R7Q15435 360 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 UBE2V2Q15819 145 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 CCDC122Q5T0U0 273 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 MEDAGQ5VYS4 303 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 SLC39A4Q6P5W5 647 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 ARSKQ6UWY0 536 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 ANGPTL8Q6UXH0 198 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 BAIAP2L2Q6UXY1 529 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 WASH2PQ6VEQ5 465 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 GCNT7Q6ZNI0 430 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 RGS9BPQ6ZS82 235 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 UNC5CLQ8IV45 518 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 MYOCDQ8IZQ8 938 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 FAM133AQ8N9E0 248 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 TFB1MQ8WVM0 346 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 CTNNBL1Q8WYA6 563 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 ADIPOR1Q96A54 375 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 PPP1R16AQ96I34 528 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 VSTM2LQ96N03 204 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 TBCDQ9BTW9 1192 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 HCAR1Q9BXC0 346 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 CCSER1Q9C0I3 900 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 VCPKMTQ9H867 229 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 LPAR2Q9HBW0 351 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 ANKMY1Q9P2S6 941 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 ABCD2Q9UBJ2 740 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 ASB3Q9Y575 518 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 CUX2O14529 1486 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 AKNAQ7Z591 1439 aa3.26□□□□□ -1.89
SMCHD1-213ENST00000609587 BRD4O60885 1362 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-213ENST00000609587 CENPJQ9HC77 1338 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-213ENST00000609587 A8MX80 341 aa3.25□□□□□ -1.89
SMCHD1-213ENST00000609587 TM9SF1O15321 606 aa3.25□□□□□ -1.89
SMCHD1-213ENST00000609587 PPIHO43447 177 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-213ENST00000609587 PEX11AO75192 247 aa3.25□□□□□ -1.89
SMCHD1-213ENST00000609587 SRSF10O75494 262 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-213ENST00000609587 CT45A10P0DMU9 189 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms