RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SLC6A5Q9Y345 797 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 NUPL2O15504 423 aaKnown RBP12.38□□□□□ -0.43
USP6NL-205ENST00000609104 GSRP00390 522 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 SPINT3P49223 89 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 CYB561A3Q8NBI2 242 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 ABHD11Q8NFV4 315 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 WDR92Q96MX6 357 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 A6NIN4 97 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 MSR1P21757 451 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 CHATP28329 748 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 PITX1P78337 314 aaPredicted RBP12.38□□□□□ -0.43
USP6NL-205ENST00000609104 CDK3Q00526 305 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 AARDQ4LEZ3 155 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 KIAA0895LQ68EN5 471 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 MFSD6LQ8IWD5 586 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 SUMF2Q8NBJ7 301 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 BEST4Q8NFU0 473 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 C12orf42Q96LP6 360 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 OR5B2Q96R09 309 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 RIMS3Q9UJD0 308 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 TP53TG5Q9Y2B4 290 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 PCDHGA7Q9Y5G6 932 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 LAMP1P11279 417 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 WDTC1Q8N5D0 677 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 OR5L2Q8NGL0 311 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 AGAP4Q96P64 663 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 SLC25A18Q9H1K4 315 aa12.38□□□□□ -0.43
USP6NL-205ENST00000609104 ZNF888P0CJ79 500 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ZNF551Q7Z340 670 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 RBM12BQ8IXT5 1001 aaKnown RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 OR51E2Q9H255 320 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ZNF334Q9HCZ1 680 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 NUP205Q92621 2012 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 PEX14O75381 377 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 BMP4P12644 408 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 PRKACBP22694 351 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 DCST2Q5T1A1 773 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 LETMD1Q6P1Q0 360 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 CD163Q86VB7 1156 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ZNF160Q9HCG1 818 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 GRM7Q14831 915 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ZNF585AQ6P3V2 769 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 COMMD6Q7Z4G1 85 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 TMEM135Q86UB9 458 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 TRAPPC13A5PLN9 417 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 MEIS3P2A8K0S8 358 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ZNF736B4DX44 427 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 AK1P00568 194 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 TPT1P13693 172 aaKnown RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 OR52E8Q6IFG1 317 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 GPRIN1Q7Z2K8 1008 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 B3GNT7Q8NFL0 401 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 TM9SF4Q92544 642 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 DNAJC15Q9Y5T4 150 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 GJE1A6NN92 205 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ETV4P43268 484 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 IL13RA1P78552 427 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 BOCQ9BWV1 1114 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 GAAP10253 952 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 BPIP17213 487 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 PIN1Q13526 163 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 SF3A2Q15428 464 aaKnown RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 BEX5Q5H9J7 111 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 OR5D16Q8NGK9 328 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 SMIM3Q9BZL3 60 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 TXNL1O43396 289 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 GJA5P36382 358 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 PIP5KL1Q5T9C9 394 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 PRAMEF8Q5VWM4 474 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 PRAMEF7Q5VXH5 474 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 L3HYPDHQ96EM0 354 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 AKAP12Q02952 1782 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 AKAIN1P0CW23 69 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ARSBP15848 533 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 PRMT2P55345 433 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 SDR9C7Q8NEX9 313 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 SNAPC3Q92966 411 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ATG4BQ9Y4P1 393 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 LOC285095A0A1B0GVY8 99 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 H3BML4 177 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 K7ERQ8 282 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 ARSDP51689 593 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 SLC6A16Q9GZN6 736 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 HRH4Q9H3N8 390 aa12.37□□□□□ -0.43
USP6NL-205ENST00000609104 CNOT11Q9UKZ1 510 aaKnown RBP12.37□□□□□ -0.43
USP6NL-205ENST00000609104 IL17RDQ8NFM7 739 aa12.36□□□□□ -0.43
USP6NL-205ENST00000609104 SENP5Q96HI0 755 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-205ENST00000609104 PRAMEF2O60811 474 aa12.36□□□□□ -0.43
USP6NL-205ENST00000609104 PSMB10P40306 273 aa12.36□□□□□ -0.43
USP6NL-205ENST00000609104 PRPS1P60891 318 aa12.36□□□□□ -0.43
USP6NL-205ENST00000609104 P2RY14Q15391 338 aa12.36□□□□□ -0.43
USP6NL-205ENST00000609104 ISCA2Q86U28 154 aa12.36□□□□□ -0.43
USP6NL-205ENST00000609104 GOLM1Q8NBJ4 401 aa12.36□□□□□ -0.43
USP6NL-205ENST00000609104 AIPO00170 330 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms