RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 SCOCQ9UIL1 159 aa13.08□□□□□ -0.32
NEAT1-203ENST00000601801 SNX6Q9UNH7 406 aa13.08□□□□□ -0.32
NEAT1-203ENST00000601801 TIMM22Q9Y584 194 aa13.08□□□□□ -0.32
NEAT1-203ENST00000601801 FREM3P0C091 2139 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 HSPB2A8KAH6 182 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 H0YJX3 145 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 ULK1O75385 1050 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 TRAPPC6AO75865 159 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 PDYNP01213 254 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 MAPK1P28482 360 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 POLR2JP52435 117 aaKnown RBP13.07□□□□□ -0.32
NEAT1-203ENST00000601801 DUSP8Q13202 625 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 HSPB2Q16082 182 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 OGFRL1Q5TC84 451 aaPredicted RBP13.07□□□□□ -0.32
NEAT1-203ENST00000601801 SLC48A1Q6P1K1 146 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 TMEM200AQ86VY9 491 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 DHFR2Q86XF0 187 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 VWA5B2Q8N398 1253 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 HIPK4Q8NE63 616 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 SELENOMQ8WWX9 145 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 ANGPTL4Q9BY76 406 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 YY1AP1Q9H869 796 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 BRF2Q9HAW0 419 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 C8orf4Q9NR00 106 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 FARSBQ9NSD9 589 aaKnown RBP13.07□□□□□ -0.32
NEAT1-203ENST00000601801 PSME2Q9UL46 239 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 CFL2Q9Y281 166 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 DTNAQ9Y4J8 743 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 PCDHA9Q9Y5H5 950 aa13.07□□□□□ -0.32
NEAT1-203ENST00000601801 PRRC2AP48634 2157 aaKnown RBP13.06□□□□□ -0.32
NEAT1-203ENST00000601801 AHRRA9YTQ3 701 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 H3BNX3 289 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 ERAL1O75616 437 aaKnown RBP13.06□□□□□ -0.32
NEAT1-203ENST00000601801 ATP1B1P05026 303 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 HPNP05981 417 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 HOXB6P17509 224 aaKnown RBP13.06□□□□□ -0.32
NEAT1-203ENST00000601801 CSNK2A2P19784 350 aaPredicted RBP13.06□□□□□ -0.32
NEAT1-203ENST00000601801 ABCD3P28288 659 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 SLC7A1P30825 629 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 FEN1P39748 380 aaKnown RBP13.06□□□□□ -0.32
NEAT1-203ENST00000601801 CASP3P42574 277 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 EEFSECP57772 596 aaKnown RBP13.06□□□□□ -0.32
NEAT1-203ENST00000601801 MAP4K2Q12851 820 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 MED21Q13503 144 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 NFYCQ13952 458 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 TOMM20Q15388 145 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.32
NEAT1-203ENST00000601801 IMPG1Q17R60 797 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 PRICKLE4Q2TBC4 344 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 VPS26BQ4G0F5 336 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 BICRALQ6AI39 1079 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 LETMD1Q6P1Q0 360 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 PRR22Q8IZ63 422 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 DPP10Q8N608 796 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 TNIP2Q8NFZ5 429 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 LRRC58Q96CX6 371 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 SH3GL1Q99961 368 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 FAIM2Q9BWQ8 316 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 ZNF225Q9UK10 706 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 CES1P1Q9UKY3 287 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 AP4S1Q9Y587 144 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 EXPH5Q8NEV8 1989 aa13.06□□□□□ -0.32
NEAT1-203ENST00000601801 PRSS51A0A1B0GVH4 220 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 SERTM1A2A2V5 107 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 PPM1BO75688 479 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 EPPINO95925 133 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 ABCB1P08183 1280 aaPredicted RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 UMPSP11172 480 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 FCGR1AP12314 374 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 UQCRBP14927 111 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 NAGAP17050 411 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 S1PR1P21453 382 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 DNAJA1P31689 397 aaKnown RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 CDK9P50750 372 aaKnown RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 SLC7A2P52569 658 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 MRPS22P82650 360 aaKnown RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 CRYZQ08257 329 aaKnown RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 GRAMD1BQ3KR37 738 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 FAM111BQ6SJ93 734 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 ARSKQ6UWY0 536 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 TGIF2LYQ8IUE0 185 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 PM20D2Q8IYS1 436 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 C1orf52Q8N6N3 182 aaKnown RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 OR9I1Q8NGQ6 314 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 TM4SF18Q96CE8 201 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 LRRC46Q96FV0 321 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 TMEM41AQ96HV5 264 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 GNRHR2Q96P88 292 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 TIMP4Q99727 224 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 NXF5Q9H1B4 397 aaKnown RBP13.05□□□□□ -0.32
NEAT1-203ENST00000601801 CXXC4Q9H2H0 198 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 UBQLN3Q9H347 655 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 METTL7AQ9H8H3 244 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 ACTR3BQ9P1U1 418 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 VPS29Q9UBQ0 182 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 RAB26Q9ULW5 256 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 MAPRE3Q9UPY8 281 aa13.05□□□□□ -0.32
NEAT1-203ENST00000601801 TMED5Q9Y3A6 229 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms