RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ATP12AP54707 1039 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 LRRC23Q53EV4 343 aaPredicted RBP18.78■□□□□ 0.6
PNKP-215ENST00000600910 PATL1Q86TB9 770 aaKnown RBP18.78■□□□□ 0.6
PNKP-215ENST00000600910 KRT73Q86Y46 540 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 GPALPP1Q8IXQ4 340 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 TTC9Q92623 222 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 PMM1Q92871 262 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 TMCO6Q96DC7 493 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 ZNF607Q96SK3 696 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 LRFN1Q9P244 771 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 PCDHGA9Q9Y5G4 932 aaKnown RBP18.78■□□□□ 0.6
PNKP-215ENST00000600910 GPC6Q9Y625 555 aaPredicted RBP18.78■□□□□ 0.6
PNKP-215ENST00000600910 ANKRD65E5RJM6 399 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 M0QX08 132 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 TP53I11O14683 189 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 PDE9AO76083 593 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 OXSR1O95747 527 aaPredicted RBP18.78■□□□□ 0.6
PNKP-215ENST00000600910 KDELR2P33947 212 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 CRYBA2P53672 197 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 POLE2P56282 527 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 MAPK14Q16539 360 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 IGFL2Q6UWQ7 119 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 ZNF227Q86WZ6 799 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 PEX5LQ8IYB4 626 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 ZNF614Q8N883 585 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 SPPL2AQ8TCT8 520 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 FAM162AQ96A26 154 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 SGCZQ96LD1 299 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 HOXD1Q9GZZ0 328 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 RNF32Q9H0A6 362 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 TRIM45Q9H8W5 580 aaPredicted RBP18.78■□□□□ 0.6
PNKP-215ENST00000600910 ACTR3BQ9P1U1 418 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 POMPQ9Y244 141 aa18.78■□□□□ 0.6
PNKP-215ENST00000600910 CHCHD2Q9Y6H1 151 aaPredicted RBP18.78■□□□□ 0.6
PNKP-215ENST00000600910 ACACBO00763 2458 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 OR5H15A6NDH6 313 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 AGAP5A6NIR3 686 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 MKRN2OSH3BPM6 223 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 CDK2AP1O14519 115 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 OPN1SWP03999 348 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 HPGDP15428 266 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 TBXA2RP21731 343 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 RPS4Y1P22090 263 aaKnown RBP18.77■□□□□ 0.6
PNKP-215ENST00000600910 EVI2BP34910 448 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 ZNF141Q15928 474 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 PDZK1Q5T2W1 519 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 SPINK14Q6IE38 97 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 RTL4Q6ZR62 310 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 MDGA2Q7Z553 956 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 ZNF527Q8NB42 609 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 OR52P1PQ8NH57 321 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 HAS2Q92819 552 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 SIGLEC12Q96PQ1 595 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 MUC13Q9H3R2 512 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 PRORYQ9H606 182 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 GORASP2Q9H8Y8 452 aa18.77■□□□□ 0.6
PNKP-215ENST00000600910 SCDO00767 359 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 ACOT8O14734 319 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 FADS1O60427 444 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 SERPINB7O75635 380 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 NEURL1O76050 574 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 NGFRP08138 427 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 PABPC4LP0CB38 370 aaKnown RBP18.76■□□□□ 0.59
PNKP-215ENST00000600910 NQO1P15559 274 aaKnown RBP18.76■□□□□ 0.59
PNKP-215ENST00000600910 RNF144AP50876 292 aaPredicted RBP18.76■□□□□ 0.59
PNKP-215ENST00000600910 ARG2P78540 354 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 OR1C1Q15619 314 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 APOOLQ6UXV4 268 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 CYP2R1Q6VVX0 501 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 DHFR2Q86XF0 187 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 VRK2Q86Y07 508 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 ARMC8Q8IUR7 673 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 GOLM1Q8NBJ4 401 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 POGLUT1Q8NBL1 392 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 GRHL3Q8TE85 626 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 PAQR8Q8TEZ7 354 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 TAMM41Q96BW9 452 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 CNTNAP3BQ96NU0 1288 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 RAB3IPQ96QF0 476 aaPredicted RBP18.76■□□□□ 0.59
PNKP-215ENST00000600910 SPATA5L1Q9BVQ7 753 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 CNTNAP3Q9BZ76 1288 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 CACYBPQ9HB71 228 aaKnown RBP18.76■□□□□ 0.59
PNKP-215ENST00000600910 SH2D2AQ9NP31 389 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 SEC14L3Q9UDX4 400 aa18.76■□□□□ 0.59
PNKP-215ENST00000600910 DSPP15924 2871 aaKnown RBP18.76■□□□□ 0.59
PNKP-215ENST00000600910 MFN2O95140 757 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 DBIP07108 87 aaKnown RBP18.75■□□□□ 0.59
PNKP-215ENST00000600910 CCL3P10147 92 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 IL7RP16871 459 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 ATP6V1B2P21281 511 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 RPP38P78345 283 aaKnown RBP18.75■□□□□ 0.59
PNKP-215ENST00000600910 DMTNQ08495 405 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 TRAP1Q12931 704 aaKnown RBP18.75■□□□□ 0.59
PNKP-215ENST00000600910 KLHL26Q53HC5 615 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 ZNF311Q5JNZ3 666 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 SLC22A10Q63ZE4 541 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 BICRALQ6AI39 1079 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 SMYD1Q8NB12 490 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 SLC26A7Q8TE54 656 aa18.75■□□□□ 0.59
PNKP-215ENST00000600910 NSMCE2Q96MF7 247 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms