RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 SDR39U1Q9NRG7 319 aaPredicted RBP12.61□□□□□ -0.39
UPF1-205ENST00000598209 ZIM2Q9NZV7 527 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 BTNL2Q9UIR0 455 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 DKKL1Q9UK85 242 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 KCNE3Q9Y6H6 103 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 B4DXG7 233 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 WDR1O75083 606 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 OXSR1O95747 527 aaPredicted RBP12.6□□□□□ -0.39
UPF1-205ENST00000598209 ANGPTL1O95841 491 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 NGFRP08138 427 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 GP1BBP13224 206 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 TBXA2RP21731 343 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 ACVR2AP27037 513 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 SRD5A2P31213 254 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 AQP5P55064 265 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 CRYZQ08257 329 aaKnown RBP12.6□□□□□ -0.39
UPF1-205ENST00000598209 DCST2Q5T1A1 773 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 TMEM211Q6ICI0 200 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 APOOLQ6UXV4 268 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 MIER2Q8N344 545 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 MARVELD2Q8N4S9 558 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 FADS6Q8N9I5 356 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 OR2M3Q8NG83 312 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 OR4C3Q8NH37 302 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 OR14L1PQ8NHC6 308 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 GOT1L1Q8NHS2 421 aaPredicted RBP12.6□□□□□ -0.39
UPF1-205ENST00000598209 DUSP19Q8WTR2 217 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 PANX1Q96RD7 426 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 SLC35A5Q9BS91 424 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 INPP5KQ9BT40 448 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 CCDC28BQ9BUN5 200 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 DSN1Q9H410 356 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 ALKBH4Q9NXW9 302 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 TAS2R10Q9NYW0 307 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 MED11Q9P086 117 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 HECTD1Q9ULT8 2610 aa12.6□□□□□ -0.39
UPF1-205ENST00000598209 CCDC154A6NI56 674 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 DUXAA6NLW8 204 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 ALG1L2C9J202 215 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 IL6P05231 212 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 GABRA1P14867 456 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 BMP7P18075 431 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 ATP6V1C1P21283 382 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 TCEA1P23193 301 aaKnown RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 DPP4P27487 766 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 GCKP35557 465 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 CHI3L1P36222 383 aaPredicted RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 ZFP36L2P47974 494 aaKnown RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 CASP9P55211 416 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 DSCR4P56555 118 aaPredicted RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 STX1BP61266 288 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 C17orf67Q0P5P2 114 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 LRRC74AQ0VAA2 488 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 HSP90B2PQ58FF3 399 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 NHSL2Q5HYW2 709 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 SAXO2Q658L1 398 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 VASNQ6EMK4 673 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 XKRXQ6PP77 449 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 IFNEQ86WN2 208 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 OR9I1Q8NGQ6 314 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 MIPOL1Q8TD10 442 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 ABTB1Q969K4 478 aaPredicted RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 THOC1Q96FV9 657 aaKnown RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 TIMP4Q99727 224 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 UGT2B28Q9BY64 529 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 OR51I1Q9H343 314 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 UBQLN4Q9NRR5 601 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 FAM215AQ9Y5M1 114 aa12.59□□□□□ -0.39
UPF1-205ENST00000598209 FLNBO75369 2602 aaKnown RBP12.59□□□□□ -0.39
UPF1-205ENST00000598209 KIAA1549Q9HCM3 1950 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 NPIPA5A0A0B4J1W7 369 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 NPIPA7E9PJI5 369 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 SCDO00767 359 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 NDUFB5O43674 189 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 ZIC3O60481 467 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 EDF1O60869 148 aaKnown RBP12.58□□□□□ -0.4
UPF1-205ENST00000598209 ACTL6AO96019 429 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 NPIPA8P0DM63 369 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 HPGDP15428 266 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 AGAP20933 346 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 CDKN2CP42773 168 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 POLR2JP52435 117 aaKnown RBP12.58□□□□□ -0.4
UPF1-205ENST00000598209 NUP107P57740 925 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 PMPCAQ10713 525 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 DCST1Q5T197 706 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 RTL6Q6ICC9 239 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 TNFAIP8L2Q6P589 184 aaPredicted RBP12.58□□□□□ -0.4
UPF1-205ENST00000598209 B3GNT6Q6ZMB0 384 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 ZNF621Q6ZSS3 439 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 ULK2Q8IYT8 1036 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 ARFGAP2Q8N6H7 521 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 TRIML2Q8N7C3 387 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 GATSQ8NAP1 163 aa12.58□□□□□ -0.4
UPF1-205ENST00000598209 SDF2Q99470 211 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms