RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 HOXD4P09016 255 aaPredicted RBP15.21■□□□□ 0.03
SSBP4-204ENST00000597724 BMP7P18075 431 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 UQCRC2P22695 453 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 ART3Q13508 389 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 GSTA3Q16772 222 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 PDCD4Q53EL6 469 aaKnown RBP15.21■□□□□ 0.03
SSBP4-204ENST00000597724 CCNJQ5T5M9 372 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 CLEC4FQ8N1N0 589 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 FADS6Q8N9I5 356 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 OR4K17Q8NGC6 315 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 OR14L1PQ8NHC6 308 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 DUSP19Q8WTR2 217 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 DTNBP1Q96EV8 351 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 MARK4Q96L34 752 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 MAGEB18Q96M61 343 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 CCDC115Q96NT0 180 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 OR7D2Q96RA2 312 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 ZBTB18Q99592 522 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 UGT2B28Q9BY64 529 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 TBL1XR1Q9BZK7 514 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 DSN1Q9H410 356 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 SDR39U1Q9NRG7 319 aaPredicted RBP15.21■□□□□ 0.03
SSBP4-204ENST00000597724 ALKBH4Q9NXW9 302 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 BTNL2Q9UIR0 455 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 FAM215AQ9Y5M1 114 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 MED12Q93074 2177 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 RNF103-CHMP3A0A140T963 221 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ALG1L2C9J202 215 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ZIC3O60481 467 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 OXSR1O95747 527 aaPredicted RBP15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ANGPTL1O95841 491 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ACTL6AO96019 429 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 GABRA1P14867 456 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 MATN1P21941 496 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 DPP4P27487 766 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 COL8A1P27658 744 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 IDH3AP50213 366 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 DSCR4P56555 118 aaPredicted RBP15.2■□□□□ 0.02
SSBP4-204ENST00000597724 C17orf67Q0P5P2 114 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 PMPCAQ10713 525 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 STX5Q13190 355 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 DCST2Q5T1A1 773 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 HIST2H2BCQ6DN03 193 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 B3GNT6Q6ZMB0 384 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ACAD11Q709F0 780 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ULK2Q8IYT8 1036 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 OR2M3Q8NG83 312 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 MIPOL1Q8TD10 442 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ABTB1Q969K4 478 aaPredicted RBP15.2■□□□□ 0.02
SSBP4-204ENST00000597724 OR52E6Q96RD3 313 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 TTYH2Q9BSA4 534 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 PRDM14Q9GZV8 571 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 SERHL2Q9H4I8 314 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 UBQLN4Q9NRR5 601 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 TAS2R10Q9NYW0 307 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ZIM2Q9NZV7 527 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 MED11Q9P086 117 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 KLF2Q9Y5W3 355 aaPredicted RBP15.2■□□□□ 0.02
SSBP4-204ENST00000597724 PCNX3Q9H6A9 2034 aa15.2■□□□□ 0.02
SSBP4-204ENST00000597724 ADGRG4Q8IZF6 3080 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 IGLV3-32A0A0A0MS00 114 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 DUXAA6NLW8 204 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 AHRRA9YTQ3 701 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 POLR3GO15318 223 aaPredicted RBP15.19■□□□□ 0.02
SSBP4-204ENST00000597724 IL6P05231 212 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 ZFP36L2P47974 494 aaKnown RBP15.19■□□□□ 0.02
SSBP4-204ENST00000597724 GFRA1P56159 465 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 NUP107P57740 925 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 RPS26P62854 115 aaKnown RBP15.19■□□□□ 0.02
SSBP4-204ENST00000597724 LRRC74AQ0VAA2 488 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 CDSNQ15517 529 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 DCST1Q5T197 706 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 C1orf185Q5T7R7 199 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 SAXO2Q658L1 398 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 IFNEQ86WN2 208 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 PM20D2Q8IYS1 436 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 OR5D16Q8NGK9 328 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 RND1Q92730 232 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 WDYHV1Q96HA8 205 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 SLC35G5Q96KT7 338 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 EBF4Q9BQW3 602 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 TCF7L2Q9NQB0 619 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 COQ3Q9NZJ6 369 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 DKKL1Q9UK85 242 aa15.19■□□□□ 0.02
SSBP4-204ENST00000597724 NDUFB5O43674 189 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 CLDN14O95500 239 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 GLI4P10075 376 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 ATP6V1C1P21283 382 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 PTGER4P35408 488 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 GCKP35557 465 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 AQP5P55064 265 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 CHDHQ8NE62 594 aaPredicted RBP15.18■□□□□ 0.02
SSBP4-204ENST00000597724 SDCCAG3Q96C92 435 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 NEURL3Q96EH8 262 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 PANX1Q96RD7 426 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 SDF2Q99470 211 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 INPP5KQ9BT40 448 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 CCDC28BQ9BUN5 200 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 HOXD1Q9GZZ0 328 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 PTGES2Q9H7Z7 377 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms