RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 TFAP2EQ6VUC0 442 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 ESPNLQ6ZVH7 1005 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 CYS1Q717R9 158 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 CCDC91Q7Z6B0 441 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 ATG4DQ86TL0 474 aaPredicted RBP9.01□□□□□ -0.97
TRIM28-210ENST00000597618 TDRPQ86YL5 185 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 CCDC116Q8IYX3 515 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 ARIH2OSQ8N7S6 290 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 BANPQ8N9N5 519 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 OR2V1Q8NHB1 315 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 PYROXD1Q8WU10 500 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 FAM168AQ92567 244 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 PROX1Q92786 737 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 KAT2AQ92830 837 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 NXNL1Q96CM4 212 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 MTBPQ96DY7 904 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 CACNG6Q9BXT2 260 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 PLA2G12AQ9BZM1 189 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 RTN4RQ9BZR6 473 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 ELOVL6Q9H5J4 265 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 NOL11Q9H8H0 719 aaKnown RBP9.01□□□□□ -0.97
TRIM28-210ENST00000597618 MANSC1Q9H8J5 431 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 HHATLQ9HCP6 504 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 GIMAP4Q9NUV9 329 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 SLC12A4Q9UP95 1085 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 VDAC3Q9Y277 283 aa9.01□□□□□ -0.97
TRIM28-210ENST00000597618 A0A087WZY1 265 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 SHISA9B4DS77 424 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 TNFSF11O14788 317 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 TP73O15350 636 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 RAMP1O60894 148 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 COQ9O75208 318 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 SIX3O95343 332 aaPredicted RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 ESRRBO95718 433 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 USF1P22415 310 aaPredicted RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 ME2P23368 584 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 SSTR1P30872 391 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 PSMD4P55036 377 aaKnown RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 C21orf58P58505 322 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 IRX1P78414 480 aaPredicted RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 PSG6Q00889 435 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 IRF9Q00978 393 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 C17orf67Q0P5P2 114 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 ACAP2Q15057 778 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 RAB35Q15286 201 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 RNPS1Q15287 305 aaKnown RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 DECR1Q16698 335 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 GGTA1PQ4G0N0 100 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 TMEM201Q5SNT2 666 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 SH2D4BQ5SQS7 431 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 FAM120AOSQ5T036 256 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 PDSS1Q5T2R2 415 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 UBAP2Q5T6F2 1119 aaKnown RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 HBMQ6B0K9 141 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 SSX8Q7RTT4 187 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 MARCH3Q86UD3 253 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 CCDC25Q86WR0 208 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 CTAGE3PQ8IX95 158 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 FAM9CQ8IZT9 166 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 CENPLQ8N0S6 344 aaPredicted RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 GTPBP8Q8N3Z3 284 aaPredicted RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 ZNF525Q8N782 197 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 RNF128Q8TEB7 428 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 KCTD4Q8WVF5 259 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 REXO5Q96IC2 774 aaKnown RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 RADILQ96JH8 1075 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 TBL1XR1Q9BZK7 514 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 CHODLQ9H9P2 273 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 CBLN4Q9NTU7 201 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 NMRK1Q9NWW6 199 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 FLRT3Q9NZU0 649 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 KLHL13Q9P2N7 655 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 MRTO4Q9UKD2 239 aaKnown RBP9□□□□□ -0.97
TRIM28-210ENST00000597618 PPP2R2CQ9Y2T4 447 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 PLCE1Q9P212 2302 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 FREM1Q5H8C1 2179 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 ALPK2Q86TB3 2170 aa9□□□□□ -0.97
TRIM28-210ENST00000597618 C7orf72A4D263 438 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 ABCD4O14678 606 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 GMFGO60234 142 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 IL33O95760 270 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 ANGPTL1O95841 491 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 ADAP00813 363 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 TTKP33981 857 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 RAC1P63000 192 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 LSM11P83369 360 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRIM28-210ENST00000597618 PRR5P85299 388 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 TRAF3Q13114 568 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 ITGADQ13349 1161 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 PPA1Q15181 289 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 STK11Q15831 433 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 SGO1Q5FBB7 561 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 C11orf71Q6IPW1 123 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 KLC3Q6P597 504 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 BHLHA15Q7RTS1 189 aaPredicted RBP8.99□□□□□ -0.97
TRIM28-210ENST00000597618 MEX3DQ86XN8 651 aaKnown RBP8.99□□□□□ -0.97
TRIM28-210ENST00000597618 KLHL7Q8IXQ5 586 aa8.99□□□□□ -0.97
TRIM28-210ENST00000597618 C1orf52Q8N6N3 182 aaKnown RBP8.99□□□□□ -0.97
TRIM28-210ENST00000597618 OR7G2Q8NG99 324 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms