RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ADH7P40394 386 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 ZFP36L2P47974 494 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 SMSP52788 366 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 DGKQP52824 942 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 CLNS1AP54105 237 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 PSMD4P55036 377 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 GFRA1P56159 465 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 B3GALT5-AS1P59052 145 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 RPS26P62854 115 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 PPP2R2AP63151 447 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 PMPCAQ10713 525 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 STX5Q13190 355 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 C1orf185Q5T7R7 199 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 WLSQ5T9L3 541 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 EPGNQ6UW88 154 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 SPATA19Q7Z5L4 167 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 EID3Q8N140 333 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 COX18Q8N8Q8 333 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 OR2M3Q8NG83 312 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 OR5D16Q8NGK9 328 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 MOAP1Q96BY2 351 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 SDCCAG3Q96C92 435 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 WDYHV1Q96HA8 205 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 STACQ99469 402 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 KLHDC3Q9BQ90 382 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 BTBD2Q9BX70 525 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 ACTRT3Q9BYD9 372 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 GIN1Q9NXP7 522 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 MRTO4Q9UKD2 239 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 RNF6Q9Y252 685 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 PCDHGB3Q9Y5G1 929 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 KLF2Q9Y5W3 355 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 USH1CQ9Y6N9 552 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 CSMD2Q7Z408 3487 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 IGLV3-32A0A0A0MS00 114 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 RNF103-CHMP3A0A140T963 221 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 PRSS51A0A1B0GVH4 220 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 ALG1L2C9J202 215 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 TOXO94900 526 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 CLDN14O95500 239 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 ANGPTL1O95841 491 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 TBXA2RP21731 343 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 DPP4P27487 766 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 HTR1EP28566 365 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 SOAT1P35610 550 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 POU6F2P78424 691 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNF630Q2M218 657 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 DPY19L1Q2PZI1 675 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 SPDYE7PQ495Y7 208 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 ACSF3Q4G176 576 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 TMEM211Q6ICI0 200 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 B3GNT6Q6ZMB0 384 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 C6orf120Q7Z4R8 191 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 CCDC71Q8IV32 467 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 OR4A15Q8NGL6 344 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 OR14L1PQ8NHC6 308 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 LRRC8CQ8TDW0 803 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 DUSP19Q8WTR2 217 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 ABTB1Q969K4 478 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 OR7D2Q96RA2 312 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 G6PC3Q9BUM1 346 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 DSN1Q9H410 356 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 ALKBH4Q9NXW9 302 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 TAS2R10Q9NYW0 307 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 MED11Q9P086 117 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 PPP4R1LQ9P1A2 415 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 MRPS18CQ9Y3D5 142 aaKnown RBP9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 MPDZO75970 2070 aa9.97□□□□□ -0.81
SHKBP1-206ENST00000595523 ANKRD17O75179 2603 aaKnown RBP9.96□□□□□ -0.81
SHKBP1-206ENST00000595523 NPIPA5A0A0B4J1W7 369 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 A0A0G2JNJ9 132 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 NPIPA7E9PJI5 369 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 NPIPB9F8W1W9 429 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 DIAPH2O60879 1101 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 CPSF4O95639 269 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 ACTL6AO96019 429 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 PGRP06401 933 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 NPIPA8P0DM63 369 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 GABRA1P14867 456 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 IDO1P14902 403 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 TCEA1P23193 301 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 LCN1P31025 176 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 S100A3P33764 101 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 CDKN2CP42773 168 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 STARP49675 285 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 LHX2P50458 406 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 CASP9P55211 416 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 DSCR4P56555 118 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 CD226Q15762 336 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 PDCD4Q53EL6 469 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 DCST2Q5T1A1 773 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 ANXA8L1Q5VT79 327 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 SAXO2Q658L1 398 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 NXNQ6DKJ4 435 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 ACAD11Q709F0 780 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 OLIG3Q7RTU3 272 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 IFNEQ86WN2 208 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 LIX1LQ8IVB5 337 aa9.96□□□□□ -0.82
SHKBP1-206ENST00000595523 GOLGA6L1Q8N7Z2 621 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms