RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ACP2P11117 423 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 HPGDP15428 266 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 LBPP18428 481 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 CCT3P49368 545 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 CLNS1AP54105 237 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 EEFSECP57772 596 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 EEF1A1P68104 462 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 POU6F2P78424 691 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 DUSP5Q16690 384 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 EXOSC6Q5RKV6 272 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 DCST1Q5T197 706 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 EEF1A1P5Q5VTE0 462 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 CDC73Q6P1J9 531 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 KRTCAP2Q8N6L1 136 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 SLC16A11Q8NCK7 471 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 VPS37AQ8NEZ2 397 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 FAM110BQ8TC76 370 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 CHMP6Q96FZ7 201 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 UCN2Q96RP3 112 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 TRIB1Q96RU8 372 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 ACTRT3Q9BYD9 372 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 DPY30Q9C005 99 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 DSN1Q9H410 356 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 PIGUQ9H490 435 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 UBQLN4Q9NRR5 601 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 THAP1Q9NVV9 213 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 STOML1Q9UBI4 398 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 FOXD3Q9UJU5 478 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 PCDHGB4Q9UN71 923 aa16.1■□□□□ 0.17
SHKBP1-204ENST00000594862 GXYLT2A0PJZ3 443 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 KCNK2O95069 426 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ANGPTL1O95841 491 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 C6orf47O95873 294 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 PEPDP12955 493 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ZNF708P17019 499 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ATP6V1C1P21283 382 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 TBXA2RP21731 343 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 OPRM1P35372 400 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ASCL1P50553 236 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 MAGOHP61326 146 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 STX5Q13190 355 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 TP53BP2Q13625 1128 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 LASP1Q14847 261 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 GRAMD1BQ3KR37 738 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ANXA8L1Q5VT79 327 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 RAET1LQ5VY80 246 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 OR5M10Q6IEU7 315 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 OGFOD2Q6N063 350 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 SEM1Q6ZVN7 128 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ZNF527Q8NB42 609 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 OR8J2Q8NGG1 315 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ADAMTS15Q8TE58 950 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 TLCD1Q96CP7 247 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 PIGQQ9BRB3 760 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 NUF2Q9BZD4 464 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 UCK2Q9BZX2 261 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 C20orf27Q9GZN8 174 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 HOXD1Q9GZZ0 328 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 ZNF395Q9H8N7 513 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 MEAF6Q9HAF1 191 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 TMBIM4Q9HC24 238 aa16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 NPDC1Q9NQX5 325 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-204ENST00000594862 HCFC1P51610 2035 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 A0A087WZY1 265 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 A0A1W2PQD3 144 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 RNASET2O00584 256 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 SCDO00767 359 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 NDUFB5O43674 189 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 IL18BPO95998 194 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 PRF1P14222 555 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 HK1P19367 917 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 EFNA1P20827 205 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 LHX2P50458 406 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 PGS1Q32NB8 556 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 CHMP1BQ7LBR1 199 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 MARCH3Q86UD3 253 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 DMRTC2Q8IXT2 367 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 MEIOBQ8N635 442 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 TNIP2Q8NFZ5 429 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 FBXO30Q8TB52 745 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 DUSP19Q8WTR2 217 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 WNT2BQ93097 391 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 TESCQ96BS2 214 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 C1GALT1C1Q96EU7 318 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 PPP1R36Q96LQ0 422 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 CXorf36Q9H7Y0 433 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 KCNN3Q9UGI6 736 aa16.08■□□□□ 0.16
SHKBP1-204ENST00000594862 DUXAA6NLW8 204 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 HDAC3O15379 428 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 ZIC3O60481 467 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 OXSR1O95747 527 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 AK1P00568 194 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 IGKV1D-16P01601 117 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 ZNF17P17021 662 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 POU3F2P20265 443 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 CTSSP25774 331 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 SOAT1P35610 550 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 WDR4P57081 412 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 LRRC74AQ0VAA2 488 aa16.07■□□□□ 0.16
SHKBP1-204ENST00000594862 CASP8Q14790 479 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms