RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ZNF404Q494X3 552 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 SOWAHCQ53LP3 525 aaPredicted RBP18.31■□□□□ 0.52
CLIP3-206ENST00000593074 DCDC5Q6ZRR9 648 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 RANBP3LQ86VV4 465 aaPredicted RBP18.31■□□□□ 0.52
CLIP3-206ENST00000593074 MCATQ8IVS2 390 aaKnown RBP18.31■□□□□ 0.52
CLIP3-206ENST00000593074 SLC34A3Q8N130 599 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 CACTIN-AS1Q8N1I8 211 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 CAMKK1Q8N5S9 505 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 AMER2Q8N7J2 671 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 NANOGP1Q8N7R0 232 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 PROKR2Q8NFJ6 384 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 TMEM255BQ8WV15 326 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.31■□□□□ 0.52
CLIP3-206ENST00000593074 PRRG3Q9BZD7 231 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 UCK1Q9HA47 277 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 HHATLQ9HCP6 504 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 MRPS18AQ9NVS2 196 aaKnown RBP18.31■□□□□ 0.52
CLIP3-206ENST00000593074 KCNE5Q9UJ90 142 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 PRUNE2Q8WUY3 3088 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 DSCR3O14972 297 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 CAPZBP47756 277 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 MLLT1Q03111 559 aaPredicted RBP18.3■□□□□ 0.52
CLIP3-206ENST00000593074 ITGADQ13349 1161 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 RGS21Q2M5E4 152 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 SLC36A4Q6YBV0 504 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 NRMQ8IXM6 262 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 OR52I1Q8NGK6 324 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 HSPA12BQ96MM6 686 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 SLC38A3Q99624 504 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 RNF167Q9H6Y7 350 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 IL20Q9NYY1 176 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 SLC7A7Q9UM01 511 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 TDRD6O60522 2096 aaKnown RBP18.3■□□□□ 0.52
CLIP3-206ENST00000593074 CDHR4A6H8M9 788 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 PRODHO43272 600 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 CHST10O43529 356 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 BRINP1O60477 761 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 PFDN1O60925 122 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 RAB36O95755 333 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 CBX7O95931 251 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 PROS1P07225 676 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 CKMT1AP12532 417 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 GAS1P54826 345 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLIP3-206ENST00000593074 MAP4K2Q12851 820 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 INAQ16352 499 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 MRPL2Q5T653 305 aaKnown RBP18.3■□□□□ 0.52
CLIP3-206ENST00000593074 ZNF620Q6ZNG0 422 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 VWA5B2Q8N398 1253 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 GPR151Q8TDV0 419 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 OSTF1Q92882 214 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 SLC38A2Q96QD8 506 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 POLE3Q9NRF9 147 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 FBXO34Q9NWN3 711 aa18.3■□□□□ 0.52
CLIP3-206ENST00000593074 PEX12O00623 359 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 AQP9O43315 295 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 NKX2-2O95096 273 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 FOSL2P15408 326 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 POU6F2P78424 691 aaPredicted RBP18.29■□□□□ 0.52
CLIP3-206ENST00000593074 DGAT2L6Q6ZPD8 337 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 CENPSQ8N2Z9 138 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 TBC1D17Q9HA65 648 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 NLGN3Q9NZ94 848 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 TRIOO75962 3097 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 KNL1Q8NG31 2342 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 TRAPPC13A5PLN9 417 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 LILRA5A6NI73 299 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 KDM4EB2RXH2 506 aaPredicted RBP18.29■□□□□ 0.52
CLIP3-206ENST00000593074 PIP5K1CO60331 668 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 SRPX2O60687 465 aaPredicted RBP18.29■□□□□ 0.52
CLIP3-206ENST00000593074 COQ9O75208 318 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 HBQ1P09105 142 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 GNSP15586 552 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 HTR2AP28223 471 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 GPR4P46093 362 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 NXPH1P58417 271 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 HNRNPKP61978 463 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLIP3-206ENST00000593074 CLDN22Q8N7P3 220 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 TCTN2Q96GX1 697 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 COX4I2Q96KJ9 171 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 SPACA7Q96KW9 195 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 PRSS27Q9BQR3 290 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 CDADC1Q9BWV3 514 aa18.29■□□□□ 0.52
CLIP3-206ENST00000593074 SNTNA6NMZ2 147 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 OR10H2O60403 315 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 FMO6PO60774 539 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 MED26O95402 600 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 PRG2P13727 222 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 GABRA3P34903 492 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 SOX3P41225 446 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 RAB40BQ12829 278 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 ZNF155Q12901 538 aaPredicted RBP18.28■□□□□ 0.52
CLIP3-206ENST00000593074 MLLT11Q13015 90 aaPredicted RBP18.28■□□□□ 0.52
CLIP3-206ENST00000593074 KLHL22Q53GT1 634 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 C3orf38Q5JPI3 329 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 GALNT12Q8IXK2 581 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 OR52R1Q8NGF1 315 aa18.28■□□□□ 0.52
CLIP3-206ENST00000593074 ABTB1Q969K4 478 aaPredicted RBP18.28■□□□□ 0.52
CLIP3-206ENST00000593074 MAP3K3Q99759 626 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms