RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 FGFR1OP2Q9NVK5 253 aa13.94□□□□□ -0.18
TRIM47-206ENST00000592942 USP9XQ93008 2570 aaPredicted RBP13.94□□□□□ -0.18
TRIM47-206ENST00000592942 MED12Q93074 2177 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 DIDO1Q9BTC0 2240 aaKnown RBP13.93□□□□□ -0.18
TRIM47-206ENST00000592942 IGLV3-32A0A0A0MS00 114 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 OR14I1A6ND48 311 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 ALG1L2C9J202 215 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 NPIPB9F8W1W9 429 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 CCL21O00585 134 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 SCO2O43819 266 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
TRIM47-206ENST00000592942 KRT16P08779 473 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 ZCCHC18P0CG32 403 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 OR12D1P0DN82 309 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 HOXB9P17482 250 aaPredicted RBP13.93□□□□□ -0.18
TRIM47-206ENST00000592942 LCN1P31025 176 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 MVDP53602 400 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 GNGT1P63211 74 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 LRRC74AQ0VAA2 488 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 RCAN2Q14206 197 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 WIPI1Q5MNZ9 446 aaPredicted RBP13.93□□□□□ -0.18
TRIM47-206ENST00000592942 DCST2Q5T1A1 773 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 C3P1Q6ZMU1 363 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 MSANTD1Q6ZTZ1 278 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 OLIG3Q7RTU3 272 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 YRDCQ86U90 279 aaKnown RBP13.93□□□□□ -0.18
TRIM47-206ENST00000592942 ZFP90Q8TF47 636 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 SSC4DQ8WTU2 575 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 RAB8BQ92930 207 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 SLC35G5Q96KT7 338 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 DMRTA2Q96SC8 542 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 OR2B2Q9GZK3 357 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 DSN1Q9H410 356 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 LDAHQ9H6V9 325 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 UBQLN4Q9NRR5 601 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 PNPLA3Q9NST1 481 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 TMEM45AQ9NWC5 275 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 MED11Q9P086 117 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 B4GALT7Q9UBV7 327 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 SH3BGRL2Q9UJC5 107 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 MEMO1Q9Y316 297 aa13.93□□□□□ -0.18
TRIM47-206ENST00000592942 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
TRIM47-206ENST00000592942 DOPEY2Q9Y3R5 2298 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 A0A0G2JND7 137 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 DUXAA6NLW8 204 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 RFXANKO14593 260 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 PRRG2O14669 202 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 FCMRO60667 390 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 ANGPTL1O95841 491 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 LSP1P33241 339 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 FUT5Q11128 374 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 ARHGAP11BQ3KRB8 267 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 GTDC1Q4AE62 458 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 TIGD2Q4W5G0 525 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 KLHL26Q53HC5 615 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 NHSL2Q5HYW2 709 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 PAGE3Q5JUK9 113 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 COX20Q5RI15 118 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 VASNQ6EMK4 673 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 TNFAIP8L2Q6P589 184 aaPredicted RBP13.92□□□□□ -0.18
TRIM47-206ENST00000592942 SLC2A7Q6PXP3 512 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 NCCRP1Q6ZVX7 275 aaPredicted RBP13.92□□□□□ -0.18
TRIM47-206ENST00000592942 CD163Q86VB7 1156 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 RPRMLQ8N4K4 120 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 MARVELD2Q8N4S9 558 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 OR5M9Q8NGP3 310 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 XAGE5Q8WWM1 108 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 CHMP6Q96FZ7 201 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 CCDC120Q96HB5 630 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 TIMP4Q99727 224 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 SIKE1Q9BRV8 207 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 G6PC3Q9BUM1 346 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 TMEM120AQ9BXJ8 343 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 PAIP1Q9H074 479 aaKnown RBP13.92□□□□□ -0.18
TRIM47-206ENST00000592942 CCDC167Q9P0B6 97 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 SLAMF8Q9P0V8 285 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 KCNE5Q9UJ90 142 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 SLC6A5Q9Y345 797 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 PCDHGB3Q9Y5G1 929 aa13.92□□□□□ -0.18
TRIM47-206ENST00000592942 UTP20O75691 2785 aaKnown RBP13.92□□□□□ -0.18
TRIM47-206ENST00000592942 NPIPA5A0A0B4J1W7 369 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 A0A1W2PQD3 144 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 NPIPA7E9PJI5 369 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 HMGN4O00479 90 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 ZG16O60844 167 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 SHOX2O60902 331 aaPredicted RBP13.91□□□□□ -0.18
TRIM47-206ENST00000592942 TPOP07202 933 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 VIMP08670 466 aaKnown RBP13.91□□□□□ -0.18
TRIM47-206ENST00000592942 NPIPA8P0DM63 369 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 BMP7P18075 431 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 CAPN3P20807 821 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 SRD5A2P31213 254 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 B3GALT5-AS1P59052 145 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 STX1BP61266 288 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 IRX1P78414 480 aaPredicted RBP13.91□□□□□ -0.18
TRIM47-206ENST00000592942 ADORA2A-AS1P86434 159 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 CRYZQ08257 329 aaKnown RBP13.91□□□□□ -0.18
TRIM47-206ENST00000592942 C17orf67Q0P5P2 114 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 SF3A3Q12874 501 aaKnown RBP eCLIP13.91□□□□□ -0.183e-6■■■□□ 16.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms