RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 FAM3BP58499 235 aaPredicted RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 TAS2R50P59544 299 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 OC90Q02509 493 aaPredicted RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 TOMM20Q15388 145 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 TSTQ16762 297 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 WHAMMP3Q1A5X7 153 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 PRICKLE4Q2TBC4 344 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 TRIM40Q6P9F5 258 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 C16orf47Q6ZP98 133 aaPredicted RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 LRRC70Q7Z2Q7 622 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 MAVSQ7Z434 540 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 ZNF595Q8IYB9 648 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 LNX2Q8N448 690 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 MMGT1Q8N4V1 131 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 CPSF7Q8N684 471 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 ZNF321PQ8N8H1 164 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 TMEM178AQ8NBL3 297 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 NOA1Q8NC60 698 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 B3GNT7Q8NFL0 401 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 OR7G3Q8NG95 312 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 RHEBL1Q8TAI7 183 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 PTPMT1Q8WUK0 201 aaPredicted RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 GLMPQ8WWB7 406 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 NCLNQ969V3 563 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 RSRC1Q96IZ7 334 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 GPR137Q96N19 417 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 MAPKAP1Q9BPZ7 522 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 FUT8Q9BYC5 575 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 DEFB126Q9BYW3 111 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 LIN28AQ9H9Z2 209 aaKnown RBP6.92□□□□□ -1.3
VMP1-213ENST00000591877 NMRAL1Q9HBL8 299 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 SNX15Q9NRS6 342 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 PPP1R14DQ9NXH3 145 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 OPTCQ9UBM4 332 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 ZNF835Q9Y2P0 537 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 ACOT9Q9Y305 439 aa6.92□□□□□ -1.3
VMP1-213ENST00000591877 A0A087X1B8 175 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 A0A096LPK6 155 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 TRGV8A0A0C4DH27 118 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 NPIPA5E9PKD4 350 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 SAP18O00422 153 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 CCL21O00585 134 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CLDN4O14493 209 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ZNF354AO60765 605 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 CTNSO60931 367 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 LDB3O75112 727 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 SLC25A12O75746 678 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 NXPH3O95157 252 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 SCELO95171 688 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 KLHL2O95198 593 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 PCNAP12004 261 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CHN1P15882 459 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 MATN1P21941 496 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 HIST1H1TP22492 207 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 ATP5A1P25705 553 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 PSMA4P25789 261 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 GRK5P34947 590 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ARL1P40616 181 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 CA7P43166 264 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 MAGEA12P43365 314 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CYB561P49447 251 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 HLCSP50747 726 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CCR9P51686 369 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 NR0B1P51843 470 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 RPL15P61313 204 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 ADORA2A-AS1P86434 159 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 HSF1Q00613 529 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CKAP4Q07065 602 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 C3AR1Q16581 482 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 HIST2H2ACQ16777 129 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 TECRLQ5HYJ1 363 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 PAGE2BQ5JRK9 111 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 HIST2H2AA3Q6FI13 130 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 GRHL2Q6ISB3 625 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 MED27Q6P2C8 311 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ZNF585AQ6P3V2 769 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ACSM6Q6P461 480 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 Q6ZPB1 254 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 MDGA2Q7Z553 956 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 TEX9Q8N6V9 391 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CEP112Q8N8E3 955 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ACOT4Q8N9L9 421 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CPEB3Q8NE35 698 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 MNS1Q8NEH6 495 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ITLN2Q8WWU7 325 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 ANKRD9Q96BM1 317 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 CTHRC1Q96CG8 243 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 VMP1Q96GC9 406 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 TBCDQ9BTW9 1192 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ZNF717Q9BY31 904 aaPredicted RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 OR51B5Q9H339 312 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CDC42EP4Q9H3Q1 356 aaKnown RBP6.91□□□□□ -1.3
VMP1-213ENST00000591877 LYRM4Q9HD34 91 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ADAP2Q9NPF8 381 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 SH3BGRL2Q9UJC5 107 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 TINAGQ9UJW2 476 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 FBXW2Q9UKT8 454 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 NPIPA1Q9UND3 350 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms