RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 BPGMP07738 259 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 ANXA4P09525 319 aaPredicted RBP9.4□□□□□ -0.9
VPS4B-207ENST00000591519 IFI6P09912 130 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 BMP4P12644 408 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 PEPDP12955 493 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 CD53P19397 219 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 DDCP20711 480 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 DPP4P27487 766 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 IL12BP29460 328 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 KRT20P35900 424 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 DIO3P55073 304 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 CLDN15P56746 228 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 NAA20P61599 178 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 OCRLQ01968 901 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 CASP8Q14790 479 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 PRSS53Q2L4Q9 553 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 GLYR1Q49A26 553 aaPredicted RBP9.4□□□□□ -0.9
VPS4B-207ENST00000591519 SPDYAQ5MJ70 313 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 OR5M10Q6IEU7 315 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 OR2A2Q6IF42 318 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 LUZP2Q86TE4 346 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 NUDCD3Q8IVD9 361 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 SLC44A2Q8IWA5 706 aaPredicted RBP9.4□□□□□ -0.9
VPS4B-207ENST00000591519 FAM9CQ8IZT9 166 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 OR4N2Q8NGD1 307 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 FAM76AQ8TAV0 307 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 MGARPQ8TDB4 240 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 STARD4Q96DR4 205 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 SFXN2Q96NB2 322 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 YIPF4Q9BSR8 244 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 EBPLQ9BY08 206 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 PFDN4Q9NQP4 134 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 SDHAF3Q9NRP4 125 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 SENP1Q9P0U3 644 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 NDRG3Q9UGV2 375 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 PACSIN3Q9UKS6 424 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 C19orf53Q9UNZ5 99 aaPredicted RBP9.4□□□□□ -0.9
VPS4B-207ENST00000591519 PTGDR2Q9Y5Y4 395 aa9.4□□□□□ -0.9
VPS4B-207ENST00000591519 A0A1W2PNV4 684 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 TMEM233B4DJY2 109 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 UPK1AO00322 258 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 CASKO14936 926 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 DIAPH2O60879 1101 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 COQ9O75208 318 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 NEFHP12036 1026 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 EVI2BP34910 448 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 SERPINB4P48594 390 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 EEFSECP57772 596 aaKnown RBP9.39□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF763Q0D2J5 394 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 C2orf80Q0P641 193 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 MPP2Q14168 576 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 GANABQ14697 944 aaKnown RBP9.39□□□□□ -0.91
VPS4B-207ENST00000591519 IMPG1Q17R60 797 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 ARL13AQ5H913 290 aaPredicted RBP9.39□□□□□ -0.91
VPS4B-207ENST00000591519 FBXW10Q5XX13 1052 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 FAM71E1Q6IPT2 247 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 PLXDC2Q6UX71 529 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 CROCCP2Q86T23 111 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 GRAMD2AQ8IUY3 354 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 OR2L13Q8N349 312 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 OR2M3Q8NG83 312 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 ELP4Q96EB1 424 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 PGM2Q96G03 612 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 METTL2AQ96IZ6 378 aaKnown RBP9.39□□□□□ -0.91
VPS4B-207ENST00000591519 NEUROD4Q9HD90 331 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 BEX4Q9NWD9 120 aaPredicted RBP9.39□□□□□ -0.91
VPS4B-207ENST00000591519 GDF2Q9UK05 429 aaPredicted RBP9.39□□□□□ -0.91
VPS4B-207ENST00000591519 ABCG2Q9UNQ0 655 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 OR10H1Q9Y4A9 318 aa9.39□□□□□ -0.91
VPS4B-207ENST00000591519 IGLV3-32A0A0A0MS00 114 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 TTC36A6NLP5 189 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 NPIPB8E9PQR5 432 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 AZIN1O14977 448 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 NPHS1O60500 1241 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 LYPLA1O75608 230 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 CGAP01215 116 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 LINC00032P0C843 101 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 UROSP10746 265 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 MAP3K8P41279 467 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 MC3RP41968 323 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 ETV4P43268 484 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 KIR2DL2P43627 348 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 CPA2P48052 419 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 MAGOHP61326 146 aaKnown RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 FAM27E3Q08E93 113 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 KIAA0040Q15053 153 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 CHI3L2Q15782 390 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 TMEM44Q2T9K0 475 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 SH2D4BQ5SQS7 431 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 HHATQ5VTY9 493 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 SHEQ5VZ18 495 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF474Q6S9Z5 364 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 CHMP1BQ7LBR1 199 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 CXorf67Q86X51 503 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 DDIASQ8IXT1 998 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 GCNT2Q8N0V5 402 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 GOLGA6L1Q8N7Z2 621 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 WFDC11Q8NEX6 87 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 OR4K17Q8NGC6 315 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms