RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ELOVL5Q9NYP7 299 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 PSMC3IPQ9P2W1 217 aaPredicted RBP12.33□□□□□ -0.44
HDAC5-208ENST00000588419 GRID1Q9ULK0 1009 aa12.33□□□□□ -0.44
HDAC5-208ENST00000588419 TRIM64A6NGJ6 449 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 TRIM64BA6NI03 449 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 PDPK1O15530 556 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 EMC8O43402 210 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 AQP8O94778 261 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 SLITRK5O94991 958 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 FCGR2AP12318 317 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 CTBP2P56545 445 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 FGFBP1Q14512 234 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 NOXRED1Q6NXP6 359 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 EXOC3L1Q86VI1 746 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 LCA5Q86VQ0 697 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 GSPT2Q8IYD1 628 aaKnown RBP12.32□□□□□ -0.44
HDAC5-208ENST00000588419 OR2L13Q8N349 312 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 ELP4Q96EB1 424 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 CHMP6Q96FZ7 201 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 SH3YL1Q96HL8 342 aaPredicted RBP12.32□□□□□ -0.44
HDAC5-208ENST00000588419 LMF2Q9BU23 707 aaKnown RBP12.32□□□□□ -0.44
HDAC5-208ENST00000588419 TMEM185BQ9H7F4 350 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 RRAGDQ9NQL2 400 aaPredicted RBP12.32□□□□□ -0.44
HDAC5-208ENST00000588419 EMC9Q9Y3B6 208 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 ZNF175Q9Y473 711 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 PTGDR2Q9Y5Y4 395 aa12.32□□□□□ -0.44
HDAC5-208ENST00000588419 A0A1W2PPM1 405 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 SMIM23A6NLE4 172 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 FAM171A2A8MVW0 826 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 AKAP10O43572 662 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 GLRA3O75311 464 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 SEC22BO75396 215 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 RSL1D1O76021 490 aaKnown RBP12.31□□□□□ -0.44
HDAC5-208ENST00000588419 IGKV1D-16P01601 117 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 CD8BP10966 210 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 EFNA1P20827 205 aaPredicted RBP12.31□□□□□ -0.44
HDAC5-208ENST00000588419 TBXA2RP21731 343 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 SLC6A8P48029 635 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 C17orf67Q0P5P2 114 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 GLE1Q53GS7 698 aaKnown RBP12.31□□□□□ -0.44
HDAC5-208ENST00000588419 CLEC6AQ6EIG7 209 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 FIGNL1Q6PIW4 674 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 ZYG11AQ6WRX3 759 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 TRMT10CQ7L0Y3 403 aaKnown RBP12.31□□□□□ -0.44
HDAC5-208ENST00000588419 FAM214BQ7L5A3 538 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 LRRC75A-AS1Q8N1F1 130 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 METTL25Q8N6Q8 603 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 CLHC1Q8NHS4 586 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 ACMSDQ8TDX5 336 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 JADE3Q92613 823 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 CCDC126Q96EE4 140 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 C11orf24Q96F05 449 aaPredicted RBP12.31□□□□□ -0.44
HDAC5-208ENST00000588419 COX4I2Q96KJ9 171 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 EGLN2Q96KS0 407 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 PIP5K1AQ99755 562 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 C12orf49Q9H741 205 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 EMCNQ9ULC0 261 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 AP4B1Q9Y6B7 739 aa12.31□□□□□ -0.44
HDAC5-208ENST00000588419 PRR14LQ5THK1 2151 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-208ENST00000588419 SERTM1A2A2V5 107 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 G3V2L1 256 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 TNFSF11O14788 317 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 NDUFB5O43674 189 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 CXCL13O43927 109 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 PSMG1O95456 288 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 SYNGR4O95473 234 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 OXSR1O95747 527 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-208ENST00000588419 CGAP01215 116 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 PRPS2P11908 318 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 HPGDP15428 266 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 RNF144AP50876 292 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-208ENST00000588419 ZNF41P51814 821 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-208ENST00000588419 SLC29A2Q14542 456 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 APOOLQ6UXV4 268 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 C20orf204Q6ZNR8 217 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 FRMD7Q6ZUT3 714 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 C22orf34Q6ZV56 151 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 IKBIPQ70UQ0 350 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 GGNQ86UU5 652 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 LRRN4CLQ8ND94 238 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 NUP43Q8NFH3 380 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 OR10D3Q8NH80 312 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 ZFP28Q8NHY6 868 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 TSSK3Q96PN8 268 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 NPAS1Q99742 590 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 BDH2Q9BUT1 245 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 C12orf65Q9H3J6 166 aaKnown RBP12.3□□□□□ -0.44
HDAC5-208ENST00000588419 TNFRSF12AQ9NP84 129 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 SIRT5Q9NXA8 310 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 SH3BP4Q9P0V3 963 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 STOML1Q9UBI4 398 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 DCDC2Q9UHG0 476 aa12.3□□□□□ -0.44
HDAC5-208ENST00000588419 MCTS1Q9ULC4 181 aaKnown RBP12.3□□□□□ -0.44
HDAC5-208ENST00000588419 NUP214P35658 2090 aaPredicted RBP12.3□□□□□ -0.44
HDAC5-208ENST00000588419 NIPBLQ6KC79 2804 aaeCLIP12.29□□□□□ -0.44
HDAC5-208ENST00000588419 FREM1Q5H8C1 2179 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms