RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 GCGRP47871 477 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 AVPR1BP47901 424 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 ERVK-21P61565 698 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 GALK2Q01415 458 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 MAP4K2Q12851 820 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 P2RY14Q15391 338 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 SNAP47Q5SQN1 464 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 PIP5KL1Q5T9C9 394 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 SMARCD3Q6STE5 483 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 SHFQ7M4L6 423 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 CDH24Q86UP0 819 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 HDDC3Q8N4P3 179 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 ZFP41Q8N8Y5 198 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 PMM1Q92871 262 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF681Q96N22 645 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 STMN3Q9NZ72 180 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 RABL2AQ9UBK7 228 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-206ENST00000587730 EXTL2Q9UBQ6 330 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 RABL2BQ9UNT1 228 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 TMEM5Q9Y2B1 443 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 BOLA1Q9Y3E2 137 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 HEBP2Q9Y5Z4 205 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 LRRK1Q38SD2 2015 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 FAM86C2PA6NEL3 165 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 GLOD5A6NK44 160 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 SLC22A31A6NKX4 558 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 A6NL46 340 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 ISM1B1AKI9 464 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 DHFRP00374 187 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 CSF2RAP15509 400 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 SLC6A1P30531 599 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 CAV3P56539 151 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 NTHL1P78549 312 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF791Q3KP31 576 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-206ENST00000587730 ZNF782Q6ZMW2 699 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-206ENST00000587730 MEPCEQ7L2J0 689 aaKnown RBP17.35■□□□□ 0.37
DDX39A-206ENST00000587730 KLBQ86Z14 1044 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 SLC43A2Q8N370 569 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 RFT1Q96AA3 541 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 UPRTQ96BW1 309 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 AHCYL2Q96HN2 611 aaKnown RBP17.35■□□□□ 0.37
DDX39A-206ENST00000587730 HDHD2Q9H0R4 259 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 KLHL31Q9H511 634 aa17.35■□□□□ 0.37
DDX39A-206ENST00000587730 MUC22E2RYF6 1773 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-206ENST00000587730 IGLON5A6NGN9 336 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 UNC119BA6NIH7 251 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 RCBTB2O95199 551 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 MT-ND5P03915 603 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 TRHRP34981 398 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-206ENST00000587730 TMEM91Q6ZNR0 172 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 GHDCQ8N2G8 530 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 OR2L3Q8NG85 312 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 SLC2A12Q8TD20 617 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 DEDD2Q8WXF8 326 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 GAL3ST3Q96A11 431 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 QRSL1Q9H0R6 528 aaKnown RBP17.34■□□□□ 0.37
DDX39A-206ENST00000587730 UBQLN3Q9H347 655 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 PIGUQ9H490 435 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 TM7SF3Q9NS93 570 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 COPZ2Q9P299 210 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 FBXL21Q9UKT6 434 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 GPR55Q9Y2T6 319 aaPredicted RBP17.34■□□□□ 0.37
DDX39A-206ENST00000587730 KCNE3Q9Y6H6 103 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 CLCA3PQ9Y6N3 262 aa17.34■□□□□ 0.37
DDX39A-206ENST00000587730 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 SMIM30A4D0T7 59 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 TRAPPC13A5PLN9 417 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 ANTXRLA6NF34 631 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 PRICKLE3O43900 615 aaPredicted RBP17.33■□□□□ 0.37
DDX39A-206ENST00000587730 FMO6PO60774 539 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 OR2B3O76000 313 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 CH25HO95992 272 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 PEPDP12955 493 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 BMP7P18075 431 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 NPR2P20594 1047 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 CD79BP40259 229 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 GPR4P46093 362 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 PITPNBP48739 271 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 CSTF1Q05048 431 aaKnown RBP17.33■□□□□ 0.37
DDX39A-206ENST00000587730 DUSP8Q13202 625 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 GALEQ14376 348 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 MLF2Q15773 248 aaPredicted RBP17.33■□□□□ 0.37
DDX39A-206ENST00000587730 ARHGAP11BQ3KRB8 267 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 PUS10Q3MIT2 529 aaKnown RBP17.33■□□□□ 0.37
DDX39A-206ENST00000587730 VASNQ6EMK4 673 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 PYHIN1Q6K0P9 492 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 MFSD12Q6NUT3 480 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 NIPAL3Q6P499 406 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 PAMR1Q6UXH9 720 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 BAIAP2L2Q6UXY1 529 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 MTSS1LQ765P7 747 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 OLIG3Q7RTU3 272 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 OAFQ86UD1 273 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 CPOQ8IVL8 374 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 NKAIN4Q8IVV8 208 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 UBE2J2Q8N2K1 259 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 LRRC25Q8N386 305 aaPredicted RBP17.33■□□□□ 0.37
DDX39A-206ENST00000587730 TEX19Q8NA77 164 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 OR9A2Q8NGT5 310 aa17.33■□□□□ 0.37
DDX39A-206ENST00000587730 ING5Q8WYH8 240 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms