RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 VN1R4Q7Z5H5 301 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 UBE3DQ7Z6J8 389 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 PATL1Q86TB9 770 aaKnown RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 CHERPQ8IWX8 916 aaKnown RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 LILRA2Q8N149 483 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 RPRMLQ8N4K4 120 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 MDS2Q8NDY4 140 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 SUN3Q8TAQ9 357 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 UTP15Q8TED0 518 aaKnown RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 LRTOMTQ8WZ04 291 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 CIDECQ96AQ7 238 aaPredicted RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 TBC1D20Q96BZ9 403 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 AURKBQ96GD4 344 aaPredicted RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 POM121Q96HA1 1249 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 PYURFQ96I23 114 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 VPS50Q96JG6 964 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 GPR137Q96N19 417 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 SEPHS2Q99611 448 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 SPATA5L1Q9BVQ7 753 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 CHID1Q9BWS9 393 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 PIF1Q9H611 641 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 TRIM45Q9H8W5 580 aaPredicted RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 C3orf14Q9HBI5 128 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 PRDM7Q9NQW5 492 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 ENAMQ9NRM1 1142 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 SLC6A13Q9NSD5 602 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 MRPS33Q9Y291 106 aaKnown RBP7.24□□□□□ -1.25
VMP1-204ENST00000587259 ZNF835Q9Y2P0 537 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 HRH3Q9Y5N1 445 aa7.24□□□□□ -1.25
VMP1-204ENST00000587259 A0A1W2PQ72 361 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 MAGEA13PA6NCF6 341 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 NKX2-6A6NCS4 301 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZNF860A6NHJ4 632 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 C5orf58C9J3I9 102 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SGK494L7N484 410 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 RTCAO00442 366 aaKnown RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 GNGT2O14610 69 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 CLOCKO15516 846 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 PROM1O43490 865 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 DENRO43583 198 aaKnown RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 ASNA1O43681 348 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 TNFRSF21O75509 655 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 PRSS23O95084 383 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 NADKO95544 446 aaPredicted RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 AIFM1O95831 613 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 B3GALT4O96024 378 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 FABP3P05413 133 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 FHP07954 510 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZNF888P0CJ79 500 aaPredicted RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 ARAFP10398 606 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZNF23P17027 643 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ALOX12P18054 663 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 CSNK2A2P19784 350 aaPredicted RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 CERS1P27544 350 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SSTR2P30874 369 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 KDELR2P33947 212 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 PTGER1P34995 402 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 MAGEA2P43356 314 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 NCBP2P52298 156 aaKnown RBP eCLIP7.23□□□□□ -1.25
VMP1-204ENST00000587259 AQP4P55087 323 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 CASP6P55212 293 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 RBPJQ06330 500 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 TP53BP2Q13625 1128 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SCARB2Q14108 478 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 LRRC23Q53EV4 343 aaPredicted RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 PRAMEF8Q5VWM4 474 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 PRAMEF7Q5VXH5 474 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SAXO2Q658L1 398 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 TMEM214Q6NUQ4 689 aaKnown RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZNF793Q6ZN11 406 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 CBLL1Q75N03 491 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 CPEB2Q7Z5Q1 589 aaKnown RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 ANKRD37Q7Z713 158 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 KRT73Q86Y46 540 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 DOLPP1Q86YN1 238 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 HIPK1Q86Z02 1210 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SIAH3Q8IW03 269 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 MARVELD2Q8N4S9 558 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 OR5T3Q8NGG3 340 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 FBXO30Q8TB52 745 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZCCHC10Q8TBK6 192 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 TSLPQ969D9 159 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 EXOSC8Q96B26 276 aaKnown RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 NRBF2Q96F24 287 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SLC35G5Q96KT7 338 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZNF597Q96LX8 424 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 FRMD6Q96NE9 622 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZNF570Q96NI8 536 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 ZNF347Q96SE7 839 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 CIB1Q99828 191 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 SORBS1Q9BX66 1292 aaKnown RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 UCK2Q9BZX2 261 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 CACYBPQ9HB71 228 aaKnown RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 ANKHQ9HCJ1 492 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 A4GALTQ9NPC4 353 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 IL1RAPQ9NPH3 570 aa7.23□□□□□ -1.25
VMP1-204ENST00000587259 MKKSQ9NPJ1 570 aaPredicted RBP7.23□□□□□ -1.25
VMP1-204ENST00000587259 C14orf105Q9NVL8 296 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms