RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TSC22D1Q15714 1073 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 TSNAXIP1Q2TAA8 658 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 GRAMD1BQ3KR37 738 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 ZNF678Q5SXM1 525 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 ADAM5Q6NVV9 412 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 ZAR1Q86SH2 424 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 GALNT10Q86SR1 603 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 SAMD14Q8IZD0 417 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 DCAKDQ8WVC6 231 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 HOXB13Q92826 284 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 GFM2Q969S9 779 aaKnown RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 LMF2Q9BU23 707 aaKnown RBP10.61□□□□□ -0.71
BRCA1-225ENST00000586385 RAB17Q9H0T7 212 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 GLIPR2Q9H4G4 154 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 PTGES2Q9H7Z7 377 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 SDHAF3Q9NRP4 125 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 NMRK1Q9NWW6 199 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 SIRT5Q9NXA8 310 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 VDAC3Q9Y277 283 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 EMC9Q9Y3B6 208 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 CUBNO60494 3623 aa10.61□□□□□ -0.71
BRCA1-225ENST00000586385 A0A0J9YW62 118 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 GNG14A0A1W2PPG7 69 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 RNF212BA8MTL3 300 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 TRIM49D1C9J1S8 452 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 ADAMDEC1O15204 470 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 CXCL13O43927 109 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 DLX3O60479 287 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 COQ9O75208 318 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 NDUFS7O75251 213 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 ULK1O75385 1050 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 GCM2O75603 506 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-225ENST00000586385 IGHV4-39P01824 125 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 KRT6AP02538 564 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 KRT6BP04259 564 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 SHC1P29353 583 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 AGTR1P30556 359 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 MPIP34949 423 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 ACVR1BP36896 505 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 CDKN1AP38936 164 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 KRT6CP48668 564 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 NCBP2P52298 156 aaKnown RBP eCLIP10.6□□□□□ -0.715e-10■■■■■ 33.9
BRCA1-225ENST00000586385 ACSM2AQ08AH3 577 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 HEPACAMQ14CZ8 416 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 RASA2Q15283 850 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 SGCBQ16585 318 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 DECR1Q16698 335 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 PGGHGQ32M88 737 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 SPIN4Q56A73 249 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 ACSM2BQ68CK6 577 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 HMBOX1Q6NT76 420 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 GPRIN3Q6ZVF9 776 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 ZNF572Q7Z3I7 529 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-225ENST00000586385 RELL1Q8IUW5 271 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 GTPBP8Q8N3Z3 284 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-225ENST00000586385 OR4C3Q8NH37 302 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 POC1BQ8TC44 478 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 S100PBPQ96BU1 408 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 ELP4Q96EB1 424 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 AMDHD1Q96NU7 426 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 BBS4Q96RK4 519 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 KCNA7Q96RP8 456 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 PAFAH2Q99487 392 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 OR10A4Q9H209 315 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 GIMAP4Q9NUV9 329 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 TAS2R7Q9NYW3 318 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 SENP1Q9P0U3 644 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 GPR52Q9Y2T5 361 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 TIMM22Q9Y584 194 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 CR1P17927 2039 aa10.6□□□□□ -0.71
BRCA1-225ENST00000586385 A0A096LNT2 108 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 UBFD1O14562 309 aaKnown RBP10.59□□□□□ -0.71
BRCA1-225ENST00000586385 TNFSF11O14788 317 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 EFNA2O43921 213 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 SUPT7LO94864 414 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 CD8AP01732 235 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 INHBAP08476 426 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 ANXA4P09525 319 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-225ENST00000586385 ZNF17P17021 662 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 GABRA3P34903 492 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 RFX3P48380 749 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 FOXA1P55317 472 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 CTBP2P56545 445 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 BTKQ06187 659 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 PLPPR5Q32ZL2 321 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 NCMAPQ5T1S8 102 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 PPP4R4Q6NUP7 873 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 BEND4Q6ZU67 534 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 EXOC3L1Q86VI1 746 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 HIPK1Q86Z02 1210 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 GABRG1Q8N1C3 465 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 OR2V1Q8NHB1 315 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 METTL6Q8TCB7 284 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 PIK3R3Q92569 461 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 SLC9A6Q92581 669 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 TBL1XR1Q9BZK7 514 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 SLCO5A1Q9H2Y9 848 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 CDC42EP4Q9H3Q1 356 aaKnown RBP10.59□□□□□ -0.71
BRCA1-225ENST00000586385 C12orf49Q9H741 205 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms