RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 FAAHO00519 579 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 PEX12O00623 359 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 SOCS2O14508 198 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 OR10H3O60404 316 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 UGT2B11O75310 529 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 NME6O75414 186 aaPredicted RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 REM1O75628 298 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 CYP7B1O75881 506 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 DXOO77932 396 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 SEC24DO94855 1032 aaPredicted RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 PRSS23O95084 383 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ONECUT2O95948 504 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 LGI1O95970 557 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 CSTAP01040 98 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 C1QCP02747 245 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 RAB40ALP0C0E4 278 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ICAM2P13598 275 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TCN2P20062 427 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TNFRSF1BP20333 461 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 DRD5P21918 477 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 CAPGP40121 348 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 NOVA1P51513 510 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 CCR4P51679 360 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 RPS6KA3P51812 740 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 NR0B1P51843 470 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 ATP12AP54707 1039 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 PSG6Q00889 435 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 MGAT2Q10469 447 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 GANABQ14697 944 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 TRAM2Q15035 370 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 EBPQ15125 230 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 BTBD16Q32M84 506 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 PDZK1Q5T2W1 519 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 CCNJQ5T5M9 372 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 MRPL2Q5T653 305 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 CDCP2Q5VXM1 449 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ZNF385CQ66K41 422 aaPredicted RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 MRPL14Q6P1L8 145 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 FAM198BQ6UWH4 519 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ZNF836Q6ZNA1 936 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 LANCL3Q6ZV70 420 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 PIP4P1Q86T03 277 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TMPRSS12Q86WS5 348 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 VRK2Q86Y07 508 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 MISPQ8IVT2 679 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 DND1Q8IYX4 353 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 CDK20Q8IZL9 346 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 OFCC1Q8IZS5 231 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 C8orf59Q8N0T1 100 aaPredicted RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 IL22RA1Q8N6P7 574 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 BCORP1Q8N888 145 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ZNF615Q8N8J6 731 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TOR1AIP2Q8NFQ8 470 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 OR10G2Q8NGC3 310 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 OR8K3Q8NH51 312 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 NUBPLQ8TB37 319 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 FAM110BQ8TC76 370 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 DOK4Q8TEW6 326 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ZNF721Q8TF20 911 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 PTPMT1Q8WUK0 201 aaPredicted RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 SLC35B4Q969S0 331 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TP53INP1Q96A56 240 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 TMCO6Q96DC7 493 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ZNF597Q96LX8 424 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 CNBD2Q96M20 576 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 IP6K3Q96PC2 410 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ALPK1Q96QP1 1244 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 MCHR1Q99705 422 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 APOL4Q9BPW4 351 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ZNF559Q9BR84 538 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ADI1Q9BV57 179 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 DEFB126Q9BYW3 111 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 AMBRA1Q9C0C7 1298 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 SAP130Q9H0E3 1048 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 TMEM27Q9HBJ8 222 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 PARD6AQ9NPB6 346 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 UBQLN4Q9NRR5 601 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 USE1Q9NZ43 259 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 ABI3Q9P2A4 366 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 BLOC1S6Q9UL45 172 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 GPR55Q9Y2T6 319 aaPredicted RBP5.73□□□□□ -1.49
LIG3-206ENST00000586058 PCDHGA3Q9Y5H0 932 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 MPDZO75970 2070 aa5.73□□□□□ -1.49
LIG3-206ENST00000586058 GXYLT2A0PJZ3 443 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 CPSF4LA6NMK7 179 aaKnown RBP5.72□□□□□ -1.49
LIG3-206ENST00000586058 H0YAE9 185 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 PDLIM1O00151 329 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 TP53I11O14683 189 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 FCMRO60667 390 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 FMO6PO60774 539 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 ZFAND5O76080 213 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 DIRAS1O95057 198 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 TNFSF15O95150 251 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 OR5F1O95221 314 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 TNFAIP8O95379 198 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 IL33O95760 270 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 NUDT14O95848 222 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 DDAH2O95865 285 aa5.72□□□□□ -1.49
LIG3-206ENST00000586058 ADAP00813 363 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms