RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 VSTM2LQ96N03 204 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 BTBD9Q96Q07 612 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 OR52E6Q96RD3 313 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 NODALQ96S42 347 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 TIMP4Q99727 224 aa17.06■□□□□ 0.32
ATG4D-203ENST00000585752 SNPHO15079 494 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 TO15178 435 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 UGT2B11O75310 529 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 EPPINO95925 133 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 PGRP06401 933 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 BMP7P18075 431 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 PTPN6P29350 595 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 PEX19P40855 299 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 EIPR1Q53HC9 387 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 ENPP6Q6UWR7 440 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 YRDCQ86U90 279 aaKnown RBP17.05■□□□□ 0.32
ATG4D-203ENST00000585752 ANKRD46Q86W74 232 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 TRIML2Q8N7C3 387 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 CDRT4Q8N9R6 151 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 FAM83FQ8NEG4 500 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-203ENST00000585752 SFXN5Q8TD22 340 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 STON2Q8WXE9 905 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 SLC9A6Q92581 669 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 FAM120BQ96EK7 910 aaKnown RBP17.05■□□□□ 0.32
ATG4D-203ENST00000585752 TRIB1Q96RU8 372 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 ADOQ96SZ5 270 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 UBQLN3Q9H347 655 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 RABEP2Q9H5N1 569 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 RMND5AQ9H871 391 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 GALNT9Q9HCQ5 603 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 SDR39U1Q9NRG7 319 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-203ENST00000585752 KCNN3Q9UGI6 736 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 DKKL1Q9UK85 242 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 FAF1Q9UNN5 650 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-203ENST00000585752 APCP25054 2843 aa17.05■□□□□ 0.32
ATG4D-203ENST00000585752 C9JVG2 144 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 NME6O75414 186 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-203ENST00000585752 KCNH1O95259 989 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 ACTL6AO96019 429 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 CYP4B1P13584 511 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 BMP5P22003 454 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 UQCRC1P31930 480 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 SOX18P35713 384 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 ADH7P40394 386 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 CLK3P49761 638 aaKnown RBP17.04■□□□□ 0.32
ATG4D-203ENST00000585752 POLR2JP52435 117 aaKnown RBP17.04■□□□□ 0.32
ATG4D-203ENST00000585752 DGKQP52824 942 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 ARFIP2P53365 341 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 PNLIPRP2P54317 469 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 PSMD4P55036 377 aaKnown RBP17.04■□□□□ 0.32
ATG4D-203ENST00000585752 CORO7P57737 925 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 HBA1P69905 142 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 TFF3Q07654 80 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 SQLEQ14534 574 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 DECR1Q16698 335 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 VASNQ6EMK4 673 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 ZCCHC12Q6PEW1 402 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 CLECL1Q8IZS7 167 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 GPR151Q8TDV0 419 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 TEX37Q96LM6 180 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 TMEM120AQ9BXJ8 343 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 UGT2B28Q9BY64 529 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 NSRP1Q9H0G5 558 aaKnown RBP17.04■□□□□ 0.32
ATG4D-203ENST00000585752 CXorf36Q9H7Y0 433 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 SERHLQ9NQF3 203 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 NPDC1Q9NQX5 325 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-203ENST00000585752 LRBAP50851 2863 aa17.04■□□□□ 0.32
ATG4D-203ENST00000585752 FAM234BA2RU67 622 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 ALOX5P09917 674 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 GABRA3P34903 492 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 TIMP3P35625 211 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 CHI3L1P36222 383 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-203ENST00000585752 RFX3P48380 749 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 ATP4BP51164 291 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 LASP1Q14847 261 aaKnown RBP17.03■□□□□ 0.32
ATG4D-203ENST00000585752 CYP27C1Q4G0S4 372 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 ACSF3Q4G176 576 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-203ENST00000585752 NHSL2Q5HYW2 709 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 FNDC7Q5VTL7 733 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 DESI1Q6ICB0 168 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 AAGABQ6PD74 315 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 IFNEQ86WN2 208 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 PLCZ1Q86YW0 608 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 OR5AK3PQ8NH89 298 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 PSMA8Q8TAA3 256 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 FBXO30Q8TB52 745 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 SLC35A4Q96G79 324 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 PANX1Q96RD7 426 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 YIPF4Q9BSR8 244 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 LMF2Q9BU23 707 aaKnown RBP17.03■□□□□ 0.32
ATG4D-203ENST00000585752 PRDM14Q9GZV8 571 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 SDHAF3Q9NRP4 125 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 SIRT3Q9NTG7 399 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-203ENST00000585752 NTMQ9P121 344 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 BTNL2Q9UIR0 455 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 CBLCQ9ULV8 474 aa17.03■□□□□ 0.32
ATG4D-203ENST00000585752 NUP214P35658 2090 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-203ENST00000585752 RNF103-CHMP3A0A140T963 221 aa17.02■□□□□ 0.32
ATG4D-203ENST00000585752 H0Y3Z8 333 aa17.02■□□□□ 0.32
ATG4D-203ENST00000585752 PSMG1O95456 288 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms