RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 POLR3FQ9H1D9 316 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-219ENST00000583294 TP53TG3Q9ULZ0 132 aa4.14□□□□□ -1.75
SMARCE1-219ENST00000583294 EIF3LQ9Y262 564 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-219ENST00000583294 GMPPBQ9Y5P6 360 aa4.14□□□□□ -1.75
SMARCE1-219ENST00000583294 A0A1B0GUL7 405 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 SAGE2PA6NJ88 616 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 DUX1O43812 170 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 RAMP1O60894 148 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 TNNI3P19429 210 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 MAGEA5P43359 124 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 MEOX2P50222 304 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 CHI3L2Q15782 390 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 RNF212Q495C1 297 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 GLYR1Q49A26 553 aaPredicted RBP4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF311Q5JNZ3 666 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 ASPHD2Q6ICH7 369 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 NIPAL3Q6P499 406 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 STAC2Q6ZMT1 411 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 CENPUQ71F23 418 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 C9orf40Q8IXQ3 194 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 TBC1D31Q96DN5 1066 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 PAXXQ9BUH6 204 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 GLT8D2Q9H1C3 349 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 RHOJQ9H4E5 214 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 DHX33Q9H6R0 707 aaKnown RBP4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 COQ10BQ9H8M1 238 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 LIN28AQ9H9Z2 209 aaKnown RBP4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 POLD4Q9HCU8 107 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 POLE3Q9NRF9 147 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 CLEC4EQ9ULY5 219 aa4.13□□□□□ -1.75
SMARCE1-219ENST00000583294 FAM220BPB1ANY3 271 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 E9PLD3 99 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 ANP32DO95626 131 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 CALCBP10092 127 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 H2AFXP16104 143 aaPredicted RBP4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 PRKAR2BP31323 418 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 NF2P35240 595 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 GNPDA1P46926 289 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF154Q13106 437 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 KCNJ11Q14654 390 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 DCAF4L1Q3SXM0 396 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 TEX44Q53QW1 395 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 HSP90AA5PQ58FG0 334 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 UFSP1Q6NVU6 142 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 LRRC8BQ6P9F7 803 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 LRRC70Q7Z2Q7 622 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 IFNEQ86WN2 208 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF525Q8N782 197 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 ZSCAN4Q8NAM6 433 aaPredicted RBP4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 OR2T33Q8NG76 320 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 CNIH3Q8TBE1 160 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 SLITRK2Q9H156 845 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 PNO1Q9NRX1 252 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 PRR34Q9NV39 138 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 EHFQ9NZC4 300 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 ISY1Q9ULR0 285 aaKnown RBP4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 B9D1Q9UPM9 204 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 MFHAS1Q9Y4C4 1052 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 U3KQV3 271 aa4.12□□□□□ -1.75
SMARCE1-219ENST00000583294 CROCCQ5TZA2 2017 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 KLF18A0A0U1RQI7 1052 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 A0A1B0GVY2 172 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 K7EPI3 171 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 LATO43561 262 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 NUDT21O43809 227 aaKnown RBP4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 JAK2O60674 1132 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 SMPD2O60906 423 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 LIM2P55344 173 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 IGLV3-21P80748 117 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 MAPK6Q16659 721 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 OR8G2PQ6IF36 304 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 SULT1C3Q6IMI6 304 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 AFTPHQ6ULP2 937 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 ZBTB44Q8NCP5 570 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 M1APQ8TC57 530 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 TRUB1Q8WWH5 349 aaKnown RBP4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 SDSLQ96GA7 329 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 C16orf45Q96MC5 204 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 DPH7Q9BTV6 452 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 MRPL13Q9BYD1 178 aaKnown RBP4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 WDR76Q9H967 626 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 CALHM2Q9HA72 323 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 GALPQ9UBC7 116 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 RNF6Q9Y252 685 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 L3MBTL1Q9Y468 752 aa4.11□□□□□ -1.75
SMARCE1-219ENST00000583294 CLDN3O15551 220 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 TRIM3O75382 744 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 PGK1P00558 417 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 CCDC166P0CW27 439 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 KIF5BP33176 963 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 RPL8P62917 257 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 NTHL1P78549 312 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 RGS1Q08116 209 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 USH1GQ495M9 461 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 LINC01620Q4KN68 170 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 FAM120AOSQ5T036 256 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF658Q5TYW1 1059 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 CBLN3Q6UW01 205 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF677Q86XU0 584 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF573Q86YE8 665 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms