RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 DUSP2Q05923 314 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 LTB4RQ15722 352 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 PDCD2Q16342 344 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 ZNF628Q5EBL2 1059 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 ARFGEF3Q5TH69 2177 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 ZNF544Q6NX49 715 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 DEF8Q6ZN54 512 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 WDR75Q8IWA0 830 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 PDIK1LQ8N165 341 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 OR2V1Q8NHB1 315 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 UHMK1Q8TAS1 419 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 WDR20Q8TBZ3 569 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 RNF128Q8TEB7 428 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 ZNF681Q96N22 645 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 CAB39LQ9H9S4 337 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 GP6Q9HCN6 339 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 KLHL13Q9P2N7 655 aa12.24□□□□□ -0.45
CSNK1D-219ENST00000581660 KMT2CQ8NEZ4 4911 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 C1orf226A1L170 272 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 SHISA8B8ZZ34 492 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 UGDHO60701 494 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 LY6HO94772 140 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 PABPC4LP0CB38 370 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 BMP4P12644 408 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 ZNF23P17027 643 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 DR1Q01658 176 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 MGAT5Q09328 741 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 ILF2Q12905 390 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 PDIA2Q13087 525 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 STX5Q13190 355 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 MORF4L2Q15014 288 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 TMEM201Q5SNT2 666 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 ESPNLQ6ZVH7 1005 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 NUFIP2Q7Z417 695 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 P2RY8Q86VZ1 359 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 MYLK4Q86YV6 388 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 CREG2Q8IUH2 290 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 GTPBP8Q8N3Z3 284 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 FBXO36Q8NEA4 188 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 CNRIP1Q96F85 164 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 UBXN10Q96LJ8 280 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 SERPINI1Q99574 410 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 FAM120CQ9NX05 1096 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 TMEFF2Q9UIK5 374 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 MGAT4BQ9UQ53 548 aa12.23□□□□□ -0.45
CSNK1D-219ENST00000581660 ESYT3A0FGR9 886 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 C7orf72A4D263 438 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 ZNF814B7Z6K7 855 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 ERAL1O75616 437 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 NTN1O95631 604 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 PSMA4P25789 261 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 SLC12A2P55011 1212 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 RAC1P63000 192 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 TIMM23BQ5SRD1 257 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 B3GLCTQ6Y288 498 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 Q6ZT83 130 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 OR4N2Q8NGD1 307 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 TRPC4APQ8TEL6 797 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 DUSP19Q8WTR2 217 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 ABHD3Q8WU67 409 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 FAM216AQ8WUB2 273 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 GCDHQ92947 438 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 EXT2Q93063 718 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 NXNL1Q96CM4 212 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 KLHL29Q96CT2 875 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 MTO1Q9Y2Z2 717 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSNK1D-219ENST00000581660 A0A087WZY1 265 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 CXorf49A8MYA2 514 aaPredicted RBP12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 TNFSF11O14788 317 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 GUCY1B2O75343 617 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 NME6O75414 186 aaPredicted RBP12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 PGM3O95394 542 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 KLK1P06870 262 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 DHRS4L1P0CG22 281 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 CTAGE8P0CG41 777 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 FABP6P51161 128 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 ARL4CP56559 192 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 STK11Q15831 433 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 CPSF6Q16630 551 aaKnown RBP eCLIP12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 CCNYL2Q5T2Q4 361 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 HBMQ6B0K9 141 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 PAGE2Q7Z2X7 111 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 SLC44A2Q8IWA5 706 aaPredicted RBP12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 CTAGE4Q8IX94 777 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 TEX9Q8N6V9 391 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 L3MBTL4Q8NA19 623 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 STAG3L4Q8TBR4 150 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 C3orf49Q96BT1 292 aa12.21□□□□□ -0.45
CSNK1D-219ENST00000581660 TSPAN17Q96FV3 270 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms