RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CORO2BQ9UQ03 480 aa9.06□□□□□ -0.96
GGA3-209ENST00000580646 PCDHB14Q9Y5E9 798 aa9.06□□□□□ -0.96
GGA3-209ENST00000580646 CCL21O00585 134 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 PEX1O43933 1283 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 HS6ST1O60243 411 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 SLC19A2O60779 497 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 NME6O75414 186 aaPredicted RBP9.05□□□□□ -0.96
GGA3-209ENST00000580646 REM1O75628 298 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 DCTN3O75935 186 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 KCNK2O95069 426 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 GSNP06396 782 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 CCL3P10147 92 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 BMP2P12643 396 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 ZNF24P17028 368 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 PRDX6P30041 224 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 CASP3P42574 277 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 MEOX1P50221 254 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 MVDP53602 400 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 CASP6P55212 293 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 FBXW4P57775 412 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 ARHGAP11BQ3KRB8 267 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 DCST2Q5T1A1 773 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 FBXW10Q5XX13 1052 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 DLEU7Q6UYE1 221 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 BNC2Q6ZN30 1099 aaPredicted RBP9.05□□□□□ -0.96
GGA3-209ENST00000580646 WDR53Q7Z5U6 358 aaPredicted RBP9.05□□□□□ -0.96
GGA3-209ENST00000580646 SPPL2CQ8IUH8 684 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 ZFAND2BQ8WV99 257 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 PIK3R3Q92569 461 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 JADE3Q92613 823 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 PMM1Q92871 262 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 CDS1Q92903 461 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 TMEM41AQ96HV5 264 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 ANKRD27Q96NW4 1050 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 ADOQ96SZ5 270 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 ANGPTL4Q9BY76 406 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 HOXD1Q9GZZ0 328 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 OR51I1Q9H343 314 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 PROK2Q9HC23 129 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 POLE3Q9NRF9 147 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 SLC6A13Q9NSD5 602 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 SLC25A37Q9NYZ2 338 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
GGA3-209ENST00000580646 SH3BGRL2Q9UJC5 107 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 LIPT1Q9Y234 373 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 ZNF835Q9Y2P0 537 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 DIDO1Q9BTC0 2240 aaKnown RBP9.05□□□□□ -0.96
GGA3-209ENST00000580646 GTF3C1Q12789 2109 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 PCNX3Q9H6A9 2034 aa9.05□□□□□ -0.96
GGA3-209ENST00000580646 DNAJC13O75165 2243 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 A0A1W2PQD3 144 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 GXYLT2A0PJZ3 443 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 CLIC1O00299 241 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 HMGN4O00479 90 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 FBP2O00757 339 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 FADS1O60427 444 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 GLSO94925 669 aaPredicted RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 CYP4B1P13584 511 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 CD1EP15812 388 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 GPX2P18283 190 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 TBXA2RP21731 343 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 ELAVL4P26378 380 aaKnown RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 PTGDSP41222 190 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 SF3A3Q12874 501 aaKnown RBP eCLIP9.04□□□□□ -0.96
GGA3-209ENST00000580646 CYLC2Q14093 348 aaPredicted RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 RGNQ15493 299 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 C3AR1Q16581 482 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 TRMT5Q32P41 509 aaKnown RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 RUNDC3AQ59EK9 446 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 ATAD3BQ5T9A4 648 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 MTFR2Q6P444 385 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 DNAJC14Q6Y2X3 702 aaPredicted RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 Q6ZPB1 254 aaPredicted RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 DHDDSQ86SQ9 333 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 RETREG3Q86VR2 466 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 RNF130Q86XS8 419 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 MSRB3Q8IXL7 192 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 PRR22Q8IZ63 422 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 CLEC4FQ8N1N0 589 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 GHDCQ8N2G8 530 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 METTL25Q8N6Q8 603 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 PCYOX1LQ8NBM8 494 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 OR2M7Q8NG81 312 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 OR5D16Q8NGK9 328 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 EFHD2Q96C19 240 aaPredicted RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 ROPN1LQ96C74 230 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 RMND5BQ96G75 393 aaPredicted RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 CCDC120Q96HB5 630 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 LRRC37BQ96QE4 947 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 NODALQ96S42 347 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 SDF2Q99470 211 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 YIPF4Q9BSR8 244 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 OSBPL11Q9BXB4 747 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 SAP130Q9H0E3 1048 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 DEPPQ9NTK1 212 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 QPCTLQ9NXS2 382 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 VAPAQ9P0L0 249 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 SLAMF8Q9P0V8 285 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms