RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 OR9I1Q8NGQ6 314 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 DUSP19Q8WTR2 217 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 ITLN2Q8WWU7 325 aaPredicted RBP17.58■□□□□ 0.4
SS18-208ENST00000577751 NEURL3Q96EH8 262 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 CHMP6Q96FZ7 201 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 SLC35G5Q96KT7 338 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 PANX1Q96RD7 426 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 TIMP4Q99727 224 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 INPP5KQ9BT40 448 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 UBQLN4Q9NRR5 601 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 PPP4R1LQ9P1A2 415 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 ACAD8Q9UKU7 415 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 PHF3Q92576 2039 aaKnown RBP17.58■□□□□ 0.4
SS18-208ENST00000577751 PTPN13Q12923 2485 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 ICE1Q9Y2F5 2266 aa17.58■□□□□ 0.4
SS18-208ENST00000577751 ASH1LQ9NR48 2969 aaKnown RBP17.57■□□□□ 0.4
SS18-208ENST00000577751 IGLV3-32A0A0A0MS00 114 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 ANGPTL1O95841 491 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 CDKN2CP42773 168 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 POLR2JP52435 117 aaKnown RBP17.57■□□□□ 0.4
SS18-208ENST00000577751 RPS26P62854 115 aaKnown RBP17.57■□□□□ 0.4
SS18-208ENST00000577751 C17orf67Q0P5P2 114 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 HSP90B2PQ58FF3 399 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 DCST2Q5T1A1 773 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 WLSQ5T9L3 541 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 RPTNQ6XPR3 784 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 MSANTD1Q6ZTZ1 278 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 YRDCQ86U90 279 aaKnown RBP17.57■□□□□ 0.4
SS18-208ENST00000577751 MARVELD2Q8N4S9 558 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 CHDHQ8NE62 594 aaPredicted RBP17.57■□□□□ 0.4
SS18-208ENST00000577751 DTNBP1Q96EV8 351 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 SDF2Q99470 211 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 SLC35A5Q9BS91 424 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 TBL1XR1Q9BZK7 514 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 SLC6A5Q9Y345 797 aa17.57■□□□□ 0.4
SS18-208ENST00000577751 C15orf38-AP3S2A0A0A6YYH1 394 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 A0A1W2PQD3 144 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 FAM234BA2RU67 622 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 CCDC154A6NI56 674 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 ZIC3O60481 467 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 WDR1O75083 606 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 CLDN1O95832 211 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 C1QCP02747 245 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 BMP7P18075 431 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 AGAP20933 346 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 ACVR2AP27037 513 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 DSCR4P56555 118 aaPredicted RBP17.56■□□□□ 0.4
SS18-208ENST00000577751 IRX1P78414 480 aaPredicted RBP17.56■□□□□ 0.4
SS18-208ENST00000577751 AP1ARQ63HQ0 302 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 HEPHL1Q6MZM0 1159 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 NCCRP1Q6ZVX7 275 aaPredicted RBP17.56■□□□□ 0.4
SS18-208ENST00000577751 MRGPRGQ86SM5 289 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 ZNF808Q8N4W9 903 aaPredicted RBP17.56■□□□□ 0.4
SS18-208ENST00000577751 OR4K17Q8NGC6 315 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 SIKE1Q9BRV8 207 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 UGT2B28Q9BY64 529 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 PRDM14Q9GZV8 571 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 OR51I1Q9H343 314 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 DSN1Q9H410 356 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 TAS2R10Q9NYW0 307 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 FAM215AQ9Y5M1 114 aa17.56■□□□□ 0.4
SS18-208ENST00000577751 FIGNL2A6NMB9 653 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 NPIPB9F8W1W9 429 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 ACTL6AO96019 429 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 AK1P00568 194 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 HOXD4P09016 255 aaPredicted RBP17.55■□□□□ 0.4
SS18-208ENST00000577751 ATP6V1C1P21283 382 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 DPP4P27487 766 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 ATP4BP51164 291 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 GFRA1P56159 465 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 STX1BP61266 288 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 STX5Q13190 355 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 ARHGAP11BQ3KRB8 267 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 RTL6Q6ICC9 239 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 TMEM211Q6ICI0 200 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 ZNF585AQ6P3V2 769 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 FUNDC1Q8IVP5 155 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 RPRMLQ8N4K4 120 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 TRIML2Q8N7C3 387 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 OR14L1PQ8NHC6 308 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 RFWD2Q8NHY2 731 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 HOXD1Q9GZZ0 328 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 HHATLQ9HCP6 504 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 SLC6A13Q9NSD5 602 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 TMEM45AQ9NWC5 275 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 MED11Q9P086 117 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 PCNX1Q96RV3 2341 aa17.55■□□□□ 0.4
SS18-208ENST00000577751 ARHGAP21Q5T5U3 1957 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 SCDO00767 359 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 RFXANKO14593 260 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 NDUFB5O43674 189 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 AGR2O95994 175 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 GSNP06396 782 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 GUSBP08236 651 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 ZCCHC18P0CG32 403 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 GABRA1P14867 456 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 CHI3L1P36222 383 aaPredicted RBP17.54■□□□□ 0.4
SS18-208ENST00000577751 SMSP52788 366 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 CASP9P55211 416 aa17.54■□□□□ 0.4
SS18-208ENST00000577751 RCAN2Q14206 197 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms