RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 OR5K1Q8NHB7 308 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 MAGEE2Q8TD90 523 aaPredicted RBP9.41□□□□□ -0.9
SS18-207ENST00000577636 SLC38A5Q8WUX1 472 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.41□□□□□ -0.9
SS18-207ENST00000577636 ITLN2Q8WWU7 325 aaPredicted RBP9.41□□□□□ -0.9
SS18-207ENST00000577636 KAT2AQ92830 837 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 ZNF597Q96LX8 424 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 ZNF570Q96NI8 536 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 DGAT2Q96PD7 388 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 BTBD2Q9BX70 525 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 PRTFDC1Q9NRG1 225 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 SLC22A11Q9NSA0 550 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 SMPD3Q9NY59 655 aaPredicted RBP9.41□□□□□ -0.9
SS18-207ENST00000577636 PLA2G3Q9NZ20 509 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 SEC14L3Q9UDX4 400 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 ABCA12Q86UK0 2595 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 LRBAP50851 2863 aa9.41□□□□□ -0.9
SS18-207ENST00000577636 ZGRF1Q86YA3 2104 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 H3BMH7 237 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 hCG_2039718K7EN88 272 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 SOCS6O14544 535 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 ADAMDEC1O15204 470 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 DENRO43583 198 aaKnown RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 FGF17O60258 216 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 B4GALT2O60909 372 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 LDB3O75112 727 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 PRSS23O95084 383 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 F10P00742 488 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 C1QCP02747 245 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 OPN1SWP03999 348 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 ALOX5P09917 674 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 CDH2P19022 906 aaPredicted RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 TNNI3P19429 210 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 DNAJA1P31689 397 aaKnown RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 IFNA8P32881 189 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 RAD23AP54725 363 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 PCBP3P57721 371 aaKnown RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 ID2Q02363 134 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 EEF1A2Q05639 463 aaKnown RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 GK3PQ14409 553 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 LTB4RQ15722 352 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 OTUD3Q5T2D3 398 aaPredicted RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 B3GNTL1Q67FW5 361 aaPredicted RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 ZCCHC12Q6PEW1 402 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 KIRREL2Q6UWL6 708 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 IGFL2Q6UWQ7 119 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 ISLR2Q6UXK2 745 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 OVCH1Q7RTY7 1134 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 GALNT10Q86SR1 603 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 GALNT12Q8IXK2 581 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 PRSS58Q8IYP2 241 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 OR2L13Q8N349 312 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 OR10Q1Q8NGQ4 319 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 OR51Q1Q8NH59 317 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 ZNF675Q8TD23 568 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 SLC9A6Q92581 669 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 RELTQ969Z4 430 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 PEX11GQ96HA9 241 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 RDH12Q96NR8 316 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 RBM4BQ9BQ04 359 aaKnown RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 YIPF4Q9BSR8 244 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 RBM4Q9BWF3 364 aaKnown RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 CHST11Q9NPF2 352 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 ENAMQ9NRM1 1142 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 NTMQ9P121 344 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 KIF17Q9P2E2 1029 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 C19orf53Q9UNZ5 99 aaPredicted RBP9.4□□□□□ -0.9
SS18-207ENST00000577636 HS3ST3B1Q9Y662 390 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 MAU2Q9Y6X3 613 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 POLEQ07864 2286 aa9.4□□□□□ -0.9
SS18-207ENST00000577636 SVILO95425 2214 aa9.4□□□□□ -0.91
SS18-207ENST00000577636 MYO7BQ6PIF6 2116 aa9.4□□□□□ -0.91
SS18-207ENST00000577636 A0A1B0GX78 115 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 MAGEA13PA6NCF6 341 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 FAM227AF5H4B4 570 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 PDLIM1O00151 329 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 UPK1AO00322 258 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 SOCS2O14508 198 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 EI24O14681 340 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 DSCR3O14972 297 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 FOXS1O43638 330 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 PLOD3O60568 738 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 AK1P00568 194 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ALBP02768 609 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 IFNA16P05015 189 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ETS2P15036 469 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 FBLP22087 321 aaKnown RBP9.39□□□□□ -0.91
SS18-207ENST00000577636 PTGER4P35408 488 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 XCR1P46094 333 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 OR1D4P47884 311 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ALDH3A2P51648 485 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 SMIM11AP58511 58 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 MRPS35P82673 323 aaKnown RBP9.39□□□□□ -0.91
SS18-207ENST00000577636 Q0VFX4 171 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 DAG1Q14118 895 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 DSG2Q14126 1118 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 PDK3Q15120 406 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 NKG7Q16617 165 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 RFX4Q33E94 735 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms