RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ERCC6LQ2NKX8 1250 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 SFRP5Q5T4F7 317 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 MROH9Q5TGP6 573 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 DNAJC14Q6Y2X3 702 aaPredicted RBP9□□□□□ -0.97
NPLOC4-220ENST00000576940 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 CREG2Q8IUH2 290 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 GABRG1Q8N1C3 465 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 PLD6Q8N2A8 252 aaKnown RBP9□□□□□ -0.97
NPLOC4-220ENST00000576940 PIWIL2Q8TC59 973 aaKnown RBP9□□□□□ -0.97
NPLOC4-220ENST00000576940 FBF1Q8TES7 1133 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 HSD17B8Q92506 261 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 SLC9A6Q92581 669 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 HDHD5Q9BXW7 423 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 AMBRA1Q9C0C7 1298 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 SHARPINQ9H0F6 387 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 DPH5Q9H2P9 285 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 ALG2Q9H553 416 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 LRTM1Q9HBL6 345 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 TAS2R9Q9NYW1 312 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 XPR1Q9UBH6 696 aa9□□□□□ -0.97
NPLOC4-220ENST00000576940 MCTS1Q9ULC4 181 aaKnown RBP9□□□□□ -0.97
NPLOC4-220ENST00000576940 A0A096LPK6 155 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 ADAMDEC1O15204 470 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 PLOD3O60568 738 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 SYNGR4O95473 234 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 ADAP00813 363 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 CHN1P15882 459 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 IL32P24001 234 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 AGTR1P30556 359 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 CLK3P49761 638 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 CASP9P55211 416 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 CDH13P55290 713 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 TRA2BP62995 288 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 RAE1P78406 368 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 IRX1P78414 480 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 RUNX1T1Q06455 604 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 LOXL1Q08397 574 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 C17orf67Q0P5P2 114 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 ZNF155Q12901 538 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 CSTF3Q12996 717 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 DECR1Q16698 335 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 CYP27C1Q4G0S4 372 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 TCHHL1Q5QJ38 904 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 CYB5R2Q6BCY4 276 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 SEZ6L2Q6UXD5 910 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 WDR75Q8IWA0 830 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 TUSC5Q8IXB3 177 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 OR2V1Q8NHB1 315 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 OSTF1Q92882 214 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 ERP27Q96DN0 273 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 TMEM185BQ9H7F4 350 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 MANSC1Q9H8J5 431 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 BARX1Q9HBU1 254 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 NGBQ9NPG2 151 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 GLRX2Q9NS18 164 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 TMEM160Q9NX00 188 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 FAM120CQ9NX05 1096 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 DMGDHQ9UI17 866 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 PCTPQ9UKL6 214 aa8.99□□□□□ -0.97
NPLOC4-220ENST00000576940 IGLV3-32A0A0A0MS00 114 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 SHISA9B4DS77 424 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 ZNF814B7Z6K7 855 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 EIF3HO15372 352 aaKnown RBP eCLIP8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 NDUFB5O43674 189 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 LMX1BO60663 402 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 UTS2O95399 124 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 IL33O95760 270 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 FESP07332 822 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 TUBBP07437 444 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 GSTA2P09210 222 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 TCP1P17987 556 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 PSMA4P25789 261 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 NUDT6P53370 316 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 RAC1P63000 192 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 PSPHP78330 225 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 VLDLRP98155 873 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 TECRLQ5HYJ1 363 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 TMEM201Q5SNT2 666 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 HBMQ6B0K9 141 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 GTF2IRD2BQ6EKJ0 949 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 LETMD1Q6P1Q0 360 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 METTL2BQ6P1Q9 378 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 KLC3Q6P597 504 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 TFAP2EQ6VUC0 442 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 GTF2IRD2Q86UP8 949 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 DTX2Q86UW9 622 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 POC1BQ8TC44 478 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 ABHD3Q8WU67 409 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 KLHDC3Q9BQ90 382 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 CACNG6Q9BXT2 260 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 TBL1XR1Q9BZK7 514 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 GRIP2Q9C0E4 1043 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 VPS11Q9H270 941 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 BRF2Q9HAW0 419 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 SLC35C2Q9NQQ7 365 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 PAQR5Q9NXK6 330 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 SENP1Q9P0U3 644 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 STOML1Q9UBI4 398 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 VPS29Q9UBQ0 182 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms