RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 TMEM44Q2T9K0 475 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 CTU2Q2VPK5 515 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 ACSM2BQ68CK6 577 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 GTF2IRD2BQ6EKJ0 949 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 RPS27LQ71UM5 84 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 MARCH3Q86UD3 253 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 GTF2IRD2Q86UP8 949 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 EXOC3L1Q86VI1 746 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 CDYL2Q8N8U2 506 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 RAB3IL1Q8TBN0 382 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 SMAP2Q8WU79 429 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 MRPL57Q9BQC6 102 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 C1QTNF3Q9BXJ4 246 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 HDHD5Q9BXW7 423 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 RTN4RQ9BZR6 473 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 MRPL46Q9H2W6 279 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 SLCO5A1Q9H2Y9 848 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 C3orf14Q9HBI5 128 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 LRTM1Q9HBL6 345 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 BARX1Q9HBU1 254 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 DDX18Q9NVP1 670 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 FLRT3Q9NZU0 649 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 LIPT1Q9Y234 373 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 VDAC3Q9Y277 283 aa10.41□□□□□ -0.74
CTDNEP1-212ENST00000576613 A0A087WZY1 265 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 A8MV72 311 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 SHISA8B8ZZ34 492 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 PPP6CO00743 305 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ULK1O75385 1050 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 KCNH1O95259 989 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 UTS2O95399 124 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ANGPTL1O95841 491 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 JUNP05412 331 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 SOD3P08294 240 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 INHBAP08476 426 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 DANCRP0C864 163 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 PABPC4LP0CB38 370 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 CTAGE8P0CG41 777 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ME2P23368 584 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 HMOX2P30519 316 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 AGTR1P30556 359 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 TIA1P31483 386 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ACVR1BP36896 505 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 CDKN1AP38936 164 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 MAGEA12P43365 314 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 NCBP2P52298 156 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 RAE1P78406 368 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 PRR5P85299 388 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 PDSS1Q5T2R2 415 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 TMEM107Q6UX40 140 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ZDHHC24Q6UX98 284 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ESPNLQ6ZVH7 1005 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 CTAGE4Q8IX94 777 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 C16orf78Q8WTQ4 265 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 S100PBPQ96BU1 408 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 HS6ST2Q96MM7 605 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ALG2Q9H553 416 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 C12orf49Q9H741 205 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 MIEF1Q9NQG6 463 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 DMGDHQ9UI17 866 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 GRID1Q9ULK0 1009 aa10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 C19orf53Q9UNZ5 99 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 MAGED1Q9Y5V3 778 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-212ENST00000576613 ABCA1O95477 2261 aa10.4□□□□□ -0.75
CTDNEP1-212ENST00000576613 C7orf72A4D263 438 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 CCDC151A5D8V7 595 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 A8MT66 165 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 MYO1GB0I1T2 1018 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 ADAMDEC1O15204 470 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 PHF1O43189 567 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 CXCL13O43927 109 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 F12P00748 615 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 C8BP07358 591 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 ANXA4P09525 319 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 FAM157CP0CG43 387 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 DDCP20711 480 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 IL32P24001 234 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 NTSP30990 170 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 HSD17B3P37058 310 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 ZNF41P51814 821 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 RAC1P63000 192 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 CLCQ05315 142 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 ZNF844Q08AG5 666 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 C2orf54Q08AI8 447 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 ZNF763Q0D2J5 394 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 ZNF672Q499Z4 452 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 TCHHL1Q5QJ38 904 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 TMEM201Q5SNT2 666 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 NCMAPQ5T1S8 102 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 HBMQ6B0K9 141 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 GALNT18Q6P9A2 607 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 GPRIN3Q6ZVF9 776 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 GALNT10Q86SR1 603 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 OR2L13Q8N349 312 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 GTPBP8Q8N3Z3 284 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 OR2V1Q8NHB1 315 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 LILRB1Q8NHL6 650 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 CDC26Q8NHZ8 85 aa10.39□□□□□ -0.75
CTDNEP1-212ENST00000576613 METTL6Q8TCB7 284 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms