RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 Q9N2J8 555 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 CISD1Q9NZ45 108 aaKnown RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 CPSF2Q9P2I0 782 aaKnown RBP8.03□□□□□ -1.12
SMG6-218ENST00000575454 VPS29Q9UBQ0 182 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 SNX24Q9Y343 169 aa8.03□□□□□ -1.12
SMG6-218ENST00000575454 IGHV4-30-2A0A087WSY4 118 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 A0A087WV62 115 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 FAM234BA2RU67 622 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 C7orf72A4D263 438 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 ELOA3DA6NLF2 546 aaPredicted RBP8.02□□□□□ -1.13
SMG6-218ENST00000575454 TTC36A6NLP5 189 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 STX16-NPEPL1H3BU86 382 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 UBFD1O14562 309 aaKnown RBP8.02□□□□□ -1.13
SMG6-218ENST00000575454 STX16O14662 325 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 ZSCAN12O43309 604 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 GPRIN2O60269 458 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 IL33O95760 270 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 ANGPTL1O95841 491 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 RBP1P09455 135 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 BMP4P12644 408 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 HSD3B1P14060 373 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 SRD5A1P18405 259 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 HSD3B2P26439 372 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 AGTR1P30556 359 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 GSTM5P46439 218 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 CARD18P57730 90 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 PRR5P85299 388 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 PSG6Q00889 435 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 DUSP2Q05923 314 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 BSPH1Q075Z2 132 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 ZNF844Q08AG5 666 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 TAB1Q15750 504 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 ELOA3BQ3SY89 546 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 CPTPQ5TA50 214 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 LIPNQ5VXI9 398 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 FAM180BQ6P0A1 224 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 GALNT10Q86SR1 603 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 MARCH3Q86UD3 253 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 GAS2L3Q86XJ1 694 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 GABRG1Q8N1C3 465 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 C1orf52Q8N6N3 182 aaKnown RBP8.02□□□□□ -1.13
SMG6-218ENST00000575454 ELOA3Q8NG57 546 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 KISS1RQ969F8 398 aaPredicted RBP8.02□□□□□ -1.13
SMG6-218ENST00000575454 MUCL1Q96DR8 90 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 PHF21BQ96EK2 531 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 ADGRG7Q96K78 797 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 BBS4Q96RK4 519 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 C12orf49Q9H741 205 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 L2HGDHQ9H9P8 463 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 SLC35C2Q9NQQ7 365 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 FBXO34Q9NWN3 711 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 MCM8Q9UJA3 840 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 PCTPQ9UKL6 214 aa8.02□□□□□ -1.13
SMG6-218ENST00000575454 A0A096LPK6 155 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 GNG14A0A1W2PPG7 69 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 C17orf51A8MQB3 221 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 NDUFB5O43674 189 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 CXCL13O43927 109 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 SMIM24O75264 130 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 GCM2O75603 506 aaPredicted RBP8.01□□□□□ -1.13
SMG6-218ENST00000575454 KCNH1O95259 989 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 PDYNP01213 254 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 CD8AP01732 235 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 KRT6AP02538 564 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 KRT6BP04259 564 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 IL3P08700 152 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 CSF3P09919 207 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 HNF1AP20823 631 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 TYK2P29597 1187 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 EIF1P41567 113 aaKnown RBP8.01□□□□□ -1.13
SMG6-218ENST00000575454 PAFAH1B1P43034 410 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 KRT6CP48668 564 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 SERPINB8P50452 374 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 ZNF41P51814 821 aaPredicted RBP8.01□□□□□ -1.13
SMG6-218ENST00000575454 IRF9Q00978 393 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 TRAF3Q13114 568 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 ITGADQ13349 1161 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 SQLEQ14534 574 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 RAB35Q15286 201 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 SH2D4BQ5SQS7 431 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 MROH9Q5TGP6 573 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 HBMQ6B0K9 141 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 MFSD12Q6NUT3 480 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 TFAP2EQ6VUC0 442 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 P2RY8Q86VZ1 359 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 CCDC25Q86WR0 208 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 TDRPQ86YL5 185 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 OR7G2Q8NG99 324 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 OR4F6Q8NGB9 312 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 ACTRT2Q8TDY3 377 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 PROX1Q92786 737 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 OSTF1Q92882 214 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 EXOSC8Q96B26 276 aaKnown RBP8.01□□□□□ -1.13
SMG6-218ENST00000575454 GPR78Q96P69 363 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 ANKRA2Q9H9E1 313 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 KLHL13Q9P2N7 655 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 RNF14Q9UBS8 474 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 GDF2Q9UK05 429 aaPredicted RBP8.01□□□□□ -1.13
SMG6-218ENST00000575454 C19orf53Q9UNZ5 99 aaPredicted RBP8.01□□□□□ -1.13
SMG6-218ENST00000575454 VDAC3Q9Y277 283 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms