RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 GAS1P54826 345 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 HPCAP84074 193 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 GPAT3Q53EU6 434 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 C4orf17Q53FE4 359 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 MISPQ8IVT2 679 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 EID3Q8N140 333 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 FAM26EQ8N5C1 309 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 WDSUB1Q8N9V3 476 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 CHDHQ8NE62 594 aaPredicted RBP13.87□□□□□ -0.19
LITAF-217ENST00000575426 OR4C3Q8NH37 302 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 PNPT1Q8TCS8 783 aaKnown RBP13.87□□□□□ -0.19
LITAF-217ENST00000575426 ZFP90Q8TF47 636 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 DUSP19Q8WTR2 217 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 RAB8BQ92930 207 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 SARAFQ96BY9 339 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 SERHL2Q9H4I8 314 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 TPT1P8Q9HAU6 139 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 SH3BGRL2Q9UJC5 107 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 LEF1Q9UJU2 399 aaPredicted RBP13.87□□□□□ -0.19
LITAF-217ENST00000575426 DKKL1Q9UK85 242 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 ACAD8Q9UKU7 415 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 SLC5A6Q9Y289 635 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 ZNF835Q9Y2P0 537 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 NDUFAF1Q9Y375 327 aa13.87□□□□□ -0.19
LITAF-217ENST00000575426 UBR5O95071 2799 aaPredicted RBP13.87□□□□□ -0.19
LITAF-217ENST00000575426 A0A096LPI6 279 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 A0A1B0GVC2 190 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 A0A1W2PP18 115 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 OR14I1A6ND48 311 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 ALG1L2C9J202 215 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 NPIPA2E9PIF3 369 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 NPIPA3F8WFD2 350 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 AQP7O14520 342 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 ANGPT2O15123 496 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 HPNP05981 417 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 SNRPB2P08579 225 aaKnown RBP13.86□□□□□ -0.19
LITAF-217ENST00000575426 ESRRAP11474 423 aaPredicted RBP13.86□□□□□ -0.19
LITAF-217ENST00000575426 CAPN3P20807 821 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 DCTP40126 519 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 CRATP43155 626 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 ATP12AP54707 1039 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 PER3P56645 1201 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 GNGT1P63211 74 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 GPR68Q15743 365 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 C1QL3Q5VWW1 255 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 Q6ZPB1 254 aaPredicted RBP13.86□□□□□ -0.19
LITAF-217ENST00000575426 CPLX4Q7Z7G2 160 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 ZAR1Q86SH2 424 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 ZNF614Q8N883 585 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 FAM83FQ8NEG4 500 aaPredicted RBP13.86□□□□□ -0.19
LITAF-217ENST00000575426 OR14L1PQ8NHC6 308 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 NEIL3Q8TAT5 605 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 FAM57AQ8TBR7 257 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 TSPEARQ8WU66 669 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 PAIP1Q9H074 479 aaKnown RBP13.86□□□□□ -0.19
LITAF-217ENST00000575426 SLC6A15Q9H2J7 730 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 UBQLN3Q9H347 655 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 DSN1Q9H410 356 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 ZNF385DQ9H6B1 395 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 MED11Q9P086 117 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 LIPT1Q9Y234 373 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 PCDHB14Q9Y5E9 798 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 LIPGQ9Y5X9 500 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 HIVEP3Q5T1R4 2406 aa13.86□□□□□ -0.19
LITAF-217ENST00000575426 ARHGAP21Q5T5U3 1957 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 PHF3Q92576 2039 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 DIDO1Q9BTC0 2240 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 C15orf38-AP3S2A0A0A6YYH1 394 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 A0A1W2PQD3 144 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 GMNCA6NCL1 334 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 TMEM247A6NEH6 219 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 GTPBP1O00178 669 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 CLIC1O00299 241 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 CCL21O00585 134 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 BCKDKO14874 412 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 LRRTM2O43300 516 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 ENDOUP21128 410 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 PPIBP23284 216 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 MSX1P28360 303 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 SRD5A2P31213 254 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 LSP1P33241 339 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 CA7P43166 264 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 GYS2P54840 703 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 DSCR4P56555 118 aaPredicted RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 UBAP2LQ14157 1087 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 MAPRE2Q15555 327 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 C3AR1Q16581 482 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 GTDC1Q4AE62 458 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 WIPI1Q5MNZ9 446 aaPredicted RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 WLSQ5T9L3 541 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 HEPHL1Q6MZM0 1159 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 MTERF4Q7Z6M4 381 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 YRDCQ86U90 279 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 FJX1Q86VR8 437 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 GATSQ8NAP1 163 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 PHOSPHO1Q8TCT1 267 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 C10orf82Q8WW14 230 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 ROPN1LQ96C74 230 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 ELAC2Q9BQ52 826 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 FAM107BQ9H098 131 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms