RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PAPD4Q6PIY7 484 aaKnown RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 DOLPP1Q86YN1 238 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CROCCP3Q8IVE0 287 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 IFT20Q8IY31 132 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RASGEF1CQ8N431 466 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RPRMLQ8N4K4 120 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 MMGT1Q8N4V1 131 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RNF10Q8N5U6 811 aaKnown RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 MLKLQ8NB16 471 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC197Q8NCU1 140 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 HCAR2Q8TDS4 363 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 FAM216AQ8WUB2 273 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ASB5Q8WWX0 329 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 C8orf44Q96CB5 159 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 LRRC45Q96CN5 670 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ECHDC3Q96DC8 303 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 COX14Q96I36 57 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RHOXF2Q9BQY4 288 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CENPKQ9BS16 269 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 HES7Q9BYE0 225 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RTN4RQ9BZR6 473 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 SLC39A8Q9C0K1 460 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 CUEDC2Q9H467 287 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 NOX4Q9NPH5 578 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 KLHL1Q9NR64 748 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 GPATCH2LQ9NWQ4 482 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 RMND1Q9NWS8 449 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 NPIPA1Q9UND3 350 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 PPIEQ9UNP9 301 aaKnown RBP4.9□□□□□ -1.63
SF3B3-214ENST00000572365 NEU3Q9UQ49 428 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 SH3GLB1Q9Y371 365 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 LRRC42Q9Y546 428 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 KIAA1549Q9HCM3 1950 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 NOTCH1P46531 2555 aa4.9□□□□□ -1.63
SF3B3-214ENST00000572365 ANK2Q01484 3957 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 NBEAL2Q6ZNJ1 2754 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 DSCAMO60469 2012 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 IGLV5-52A0A0A0MRZ9 124 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 TRIM64A6NGJ6 449 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 TRIM64BA6NI03 449 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 FAM90A26D6RGX4 464 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 DFFAO00273 331 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 MED7O43513 233 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 KCNJ13O60928 360 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 CTAG2O75638 210 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 RSL1D1O76021 490 aaKnown RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 TOXO94900 526 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 ATP6V1C1P21283 382 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 SPAM1P38567 509 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 TNFSF10P50591 281 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 NR0B1P51843 470 aaKnown RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 DLX5P56178 289 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 RBPJQ06330 500 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 CRYZQ08257 329 aaKnown RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 SLC10A7Q0GE19 358 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 ITGA9Q13797 1035 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 DHX34Q14147 1143 aaKnown RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PPP1R7Q15435 360 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 OASLQ15646 514 aaKnown RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 SYT16Q17RD7 645 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 IGSF11Q5DX21 431 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 ERMARDQ5T6L9 678 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 AGBL2Q5U5Z8 902 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 IRAK1BP1Q5VVH5 260 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 C18orf63Q68DL7 685 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 SCYL2Q6P3W7 929 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 IGFL2Q6UWQ7 119 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 ISLR2Q6UXK2 745 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 SLC26A9Q7LBE3 791 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC190Q86UF4 302 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 HOOK3Q86VS8 718 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 CDC20BQ86Y33 519 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PEX5LQ8IYB4 626 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PGBD5Q8N414 524 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 MARVELD2Q8N4S9 558 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 METTL27Q8N6F8 245 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 ACBD4Q8NC06 268 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PPFIBP2Q8ND30 876 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 OR4E2Q8NGC2 313 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 EXD1Q8NHP7 514 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 NT5C3BQ969T7 300 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 SLC35C1Q96A29 364 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PTERQ96BW5 349 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 RMND5BQ96G75 393 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 MAGED4Q96JG8 741 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 RADILQ96JH8 1075 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 ATP6V1G3Q96LB4 118 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 DGAT2Q96PD7 388 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 FCRL4Q96PJ5 515 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 CGREF1Q99674 301 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 SH3GL1Q99961 368 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 OR10A4Q9H209 315 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PPIL3Q9H2H8 161 aaKnown RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 MMP27Q9H306 513 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PDFQ9HBH1 243 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PARVBQ9HBI1 364 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF160Q9HCG1 818 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 FAM207AQ9NSI2 230 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 TAB2Q9NYJ8 693 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms