RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 AGTR1P30556 359 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 CLK3P49761 638 aaKnown RBP17.71■□□□□ 0.43
CCDC40-206ENST00000572083 RAE1P78406 368 aaKnown RBP17.71■□□□□ 0.43
CCDC40-206ENST00000572083 ZNF672Q499Z4 452 aaPredicted RBP17.71■□□□□ 0.43
CCDC40-206ENST00000572083 CYP27C1Q4G0S4 372 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 NCMAPQ5T1S8 102 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 C6orf52Q5T4I8 152 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 CEP112Q8N8E3 955 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 FBXO25Q8TCJ0 367 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 SLC9A6Q92581 669 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 ADGRG7Q96K78 797 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 HS6ST2Q96MM7 605 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 NPAS1Q99742 590 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 TBL1XR1Q9BZK7 514 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 ZNF225Q9UK10 706 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 TNFSF11O14788 317 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 OR4F21O95013 312 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 ANGPTL1O95841 491 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 THBS1P07996 1170 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 PGGHGQ32M88 737 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 KRTAP24-1Q3LI83 254 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 MFSD12Q6NUT3 480 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 TMEM107Q6UX40 140 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 APOOLQ6UXV4 268 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 STEAP2Q8NFT2 490 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 ZNF483Q8TF39 744 aaPredicted RBP17.7■□□□□ 0.42
CCDC40-206ENST00000572083 BBS4Q96RK4 519 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 NAPGQ99747 312 aaPredicted RBP17.7■□□□□ 0.42
CCDC40-206ENST00000572083 ESRP2Q9H6T0 727 aaKnown RBP17.7■□□□□ 0.42
CCDC40-206ENST00000572083 TMEM185BQ9H7F4 350 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 STOML1Q9UBI4 398 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 TMCO1Q9UM00 188 aa17.7■□□□□ 0.42
CCDC40-206ENST00000572083 GCM2O75603 506 aaPredicted RBP17.69■□□□□ 0.42
CCDC40-206ENST00000572083 UTS2O95399 124 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 NTN1O95631 604 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 IL33O95760 270 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 JUNP05412 331 aaKnown RBP17.69■□□□□ 0.42
CCDC40-206ENST00000572083 TUBBP07437 444 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 RBP1P09455 135 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 ZNF17P17021 662 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 MPIP34949 423 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 GNG11P61952 73 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 BSPH1Q075Z2 132 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 C17orf67Q0P5P2 114 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 HEPACAMQ14CZ8 416 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 TAB1Q15750 504 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 FIGNL1Q6PIW4 674 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 WDR75Q8IWA0 830 aaKnown RBP17.69■□□□□ 0.42
CCDC40-206ENST00000572083 CDYL2Q8N8U2 506 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 OR2V1Q8NHB1 315 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 C16orf78Q8WTQ4 265 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 EBPLQ9BY08 206 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 Q9N2J8 555 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 GLRX2Q9NS18 164 aa17.69■□□□□ 0.42
CCDC40-206ENST00000572083 DMGDHQ9UI17 866 aaKnown RBP17.69■□□□□ 0.42
CCDC40-206ENST00000572083 IGHV4-30-2A0A087WSY4 118 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 IGLV3-32A0A0A0MS00 114 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 MANBAO00462 879 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 IL32P24001 234 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 NCBP2P52298 156 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC40-206ENST00000572083 TRADDQ15628 312 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 PRSS53Q2L4Q9 553 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 GRAMD1BQ3KR37 738 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 CDC26Q8NHZ8 85 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 TRAF4Q9BUZ4 470 aaPredicted RBP17.68■□□□□ 0.42
CCDC40-206ENST00000572083 ACPTQ9BZG2 426 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 ALG2Q9H553 416 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 FBXO34Q9NWN3 711 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 PAQR5Q9NXK6 330 aaPredicted RBP17.68■□□□□ 0.42
CCDC40-206ENST00000572083 CDC42EP3Q9UKI2 254 aa17.68■□□□□ 0.42
CCDC40-206ENST00000572083 A0A087WV62 115 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 HAX1O00165 279 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 SSX4O60224 188 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 HSD3B1P14060 373 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 HSD3B2P26439 372 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 CSTF3Q12996 717 aaKnown RBP17.67■□□□□ 0.42
CCDC40-206ENST00000572083 HBMQ6B0K9 141 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 ZDHHC24Q6UX98 284 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 TFAP2EQ6VUC0 442 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 GABRG1Q8N1C3 465 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 C11orf24Q96F05 449 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-206ENST00000572083 APIPQ96GX9 242 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 RNF145Q96MT1 663 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 TRIM2Q9C040 744 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 LRTM1Q9HBL6 345 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 BARX1Q9HBU1 254 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-206ENST00000572083 NGBQ9NPG2 151 aa17.67■□□□□ 0.42
CCDC40-206ENST00000572083 DDX18Q9NVP1 670 aaKnown RBP17.67■□□□□ 0.42
CCDC40-206ENST00000572083 C19orf53Q9UNZ5 99 aaPredicted RBP17.67■□□□□ 0.42
CCDC40-206ENST00000572083 A0A0J9YW62 118 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 GXYLT2A0PJZ3 443 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 A8MT66 165 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 MYO1GB0I1T2 1018 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 UPK1AO00322 258 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 ADAMDEC1O15204 470 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 PSMG1O95456 288 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 IGKV1D-16P01601 117 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 CD8AP01732 235 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 PTNP21246 168 aa17.66■□□□□ 0.42
CCDC40-206ENST00000572083 ADH6P28332 368 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms