RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TBL1XR1Q9BZK7 514 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 Q9N2J8 555 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 FLRT3Q9NZU0 649 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 ZNF225Q9UK10 706 aa17.01■□□□□ 0.31
SCARF1-204ENST00000570902 MCTS1Q9ULC4 181 aaKnown RBP17.01■□□□□ 0.31
SCARF1-204ENST00000570902 IGLV3-32A0A0A0MS00 114 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 EIF1AYO14602 144 aaKnown RBP17■□□□□ 0.31
SCARF1-204ENST00000570902 ULK1O75385 1050 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 IL33O95760 270 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 ZNF17P17021 662 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 IDUAP35475 653 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 SLC6A8P48029 635 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 RAE1P78406 368 aaKnown RBP17■□□□□ 0.31
SCARF1-204ENST00000570902 CLCQ05315 142 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 ACSM2AQ08AH3 577 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 C17orf67Q0P5P2 114 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 TMEM44Q2T9K0 475 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 LGSNQ5TDP6 509 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 ACSM2BQ68CK6 577 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 ADAM5Q6NVV9 412 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 MARCH3Q86UD3 253 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 WDR75Q8IWA0 830 aaKnown RBP17■□□□□ 0.31
SCARF1-204ENST00000570902 CDYL2Q8N8U2 506 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 C16orf78Q8WTQ4 265 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 PAFAH2Q99487 392 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 TACO1Q9BSH4 297 aaKnown RBP17■□□□□ 0.31
SCARF1-204ENST00000570902 RTN4RQ9BZR6 473 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 HHATLQ9HCP6 504 aa17■□□□□ 0.31
SCARF1-204ENST00000570902 A0A087WUV0 522 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-204ENST00000570902 A8MT66 165 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 TLX2O43763 284 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-204ENST00000570902 PSMB1P20618 241 aaKnown RBP16.99■□□□□ 0.31
SCARF1-204ENST00000570902 TIA1P31483 386 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■■□□□ 11.6
SCARF1-204ENST00000570902 HSD17B3P37058 310 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCARF1-204ENST00000570902 TCHHL1Q5QJ38 904 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-204ENST00000570902 MAPK1IP1LQ8NDC0 245 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 REG4Q9BYZ8 158 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 ACPTQ9BZG2 426 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 L2HGDHQ9H9P8 463 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 C3orf14Q9HBI5 128 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 CLEC4AQ9UMR7 237 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 C19orf53Q9UNZ5 99 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-204ENST00000570902 ROS1P08922 2347 aa16.99■□□□□ 0.31
SCARF1-204ENST00000570902 USF3Q68DE3 2245 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 ANK3Q12955 4377 aaKnown RBP16.98■□□□□ 0.31
SCARF1-204ENST00000570902 A0A087WZY1 265 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 MYO1GB0I1T2 1018 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 OVOL3O00110 214 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 SYNGR4O95473 234 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 ANGPTL1O95841 491 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 DDCP20711 480 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 SERPINB9P50453 376 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 NCBP2P52298 156 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCARF1-204ENST00000570902 PRR5P85299 388 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 GALNT18Q6P9A2 607 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 TMEM107Q6UX40 140 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 STEAP2Q8NFT2 490 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 OR10D3Q8NH80 312 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 FBXW5Q969U6 566 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 GTPBP3Q969Y2 492 aaKnown RBP16.98■□□□□ 0.31
SCARF1-204ENST00000570902 APIPQ96GX9 242 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 ZNF382Q96SR6 550 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 HDHD5Q9BXW7 423 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 DDX18Q9NVP1 670 aaKnown RBP16.98■□□□□ 0.31
SCARF1-204ENST00000570902 GRID1Q9ULK0 1009 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 RNF115Q9Y4L5 304 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 SNX8Q9Y5X2 465 aa16.98■□□□□ 0.31
SCARF1-204ENST00000570902 SHISA8B8ZZ34 492 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 PSMG1O95456 288 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 JUNP05412 331 aaKnown RBP16.97■□□□□ 0.31
SCARF1-204ENST00000570902 CHN1P15882 459 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 HMOX2P30519 316 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 RFX3P48380 749 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 CTU2Q2VPK5 515 aaKnown RBP16.97■□□□□ 0.31
SCARF1-204ENST00000570902 GTF2IRD2BQ6EKJ0 949 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 GPRIN3Q6ZVF9 776 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 GTF2IRD2Q86UP8 949 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 EXOC3L1Q86VI1 746 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 HIPK1Q86Z02 1210 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 OR2L13Q8N349 312 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 METTL6Q8TCB7 284 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 TMEM158Q8WZ71 300 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 NGBQ9NPG2 151 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 MIEF1Q9NQG6 463 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 VDAC3Q9Y277 283 aa16.97■□□□□ 0.31
SCARF1-204ENST00000570902 CUBNO60494 3623 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 EXOC1LA0A1B0GW35 172 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 CCDC151A5D8V7 595 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 TTC36A6NLP5 189 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 UPK1AO00322 258 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 ADAMDEC1O15204 470 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 CD5LO43866 347 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 GMFGO60234 142 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 SUPT7LO94864 414 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 KCNH1O95259 989 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 UTS2O95399 124 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 TUBBP07437 444 aa16.96■□□□□ 0.31
SCARF1-204ENST00000570902 ANXA4P09525 319 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-204ENST00000570902 FAM153BP0C7A2 387 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms