RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ABHD3Q8WU67 409 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 KLHL29Q96CT2 875 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 RADILQ96JH8 1075 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 UBXN10Q96LJ8 280 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 FOXN4Q96NZ1 517 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 SERPINI1Q99574 410 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 BHLHE41Q9C0J9 482 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 OCEL1Q9H607 264 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 ALG9Q9H6U8 611 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 NUDT4Q9NZJ9 180 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 TMEFF2Q9UIK5 374 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 ADAM29Q9UKF5 820 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 ABCG2Q9UNQ0 655 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 VDAC3Q9Y277 283 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 RNF11Q9Y3C5 154 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 TEX264Q9Y6I9 313 aa9.22□□□□□ -0.93
CTDNEP1-202ENST00000570380 CMYA5Q8N3K9 4069 aa9.21□□□□□ -0.93
CTDNEP1-202ENST00000570380 IGLV3-32A0A0A0MS00 114 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 A0A0A6YYJ9 748 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 ESYT3A0FGR9 886 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 SUPT3HB4E1H0 165 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 SLCO1B7G3V0H7 640 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 NDUFS8O00217 210 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 DNALI1O14645 258 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 SUPT3HO75486 399 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 PIAS1O75925 651 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 BCAS2O75934 225 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 LYZL6O75951 148 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 PSMA4P25789 261 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 PSPHP78330 225 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 HBMQ6B0K9 141 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 SLC22A25Q6T423 547 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 ESPNLQ6ZVH7 1005 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 ISCA2Q86U28 154 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 TDRPQ86YL5 185 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR2W6PQ8NHA6 318 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 STAG3L4Q8TBR4 150 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 RNF128Q8TEB7 428 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 OSTF1Q92882 214 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 GCDHQ92947 438 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 TM4SF18Q96CE8 201 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 MUCL1Q96DR8 90 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 MS4A14Q96JA4 679 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 ATOH8Q96SQ7 321 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 PIMREGQ9BSJ6 248 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 MRPL1Q9BYD6 325 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 KLHL13Q9P2N7 655 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 POU2F3Q9UKI9 436 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR10H1Q9Y4A9 318 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 ANGPTL3Q9Y5C1 460 aa9.21□□□□□ -0.94
CTDNEP1-202ENST00000570380 FAM157AC9JC47 383 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 SMAD9O15198 467 aaKnown RBP9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 UGDHO60701 494 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 MTHFD2P13995 350 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 CREB1P16220 341 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF17P17021 662 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF23P17027 643 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF75DP51815 510 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 MAPK12P53778 367 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 RAC1P63000 192 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 PSG6Q00889 435 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 DLG1Q12959 904 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 IQCCQ4KMZ1 466 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 TIMM23BQ5SRD1 257 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 APOOLQ6UXV4 268 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 Q6ZT83 130 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 TBC1D1Q86TI0 1168 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 ANKMY2Q8IV38 441 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 L3MBTL4Q8NA19 623 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR9A2Q8NGT5 310 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 TRPC4APQ8TEL6 797 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 TSPAN17Q96FV3 270 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 TMEM185BQ9H7F4 350 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF696Q9H7X3 374 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 FAM120CQ9NX05 1096 aaKnown RBP9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 PRSS50Q9UI38 385 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 PSME2Q9UL46 239 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 MGAT4BQ9UQ53 548 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.2□□□□□ -0.941e-7■□□□□ 8.6
CTDNEP1-202ENST00000570380 ZNF780BQ9Y6R6 833 aa9.2□□□□□ -0.94
CTDNEP1-202ENST00000570380 LOC390937A0A1W2PQ73 354 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 LRP5LA4QPB2 252 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 KERAO60938 352 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 GUCY1B2O75343 617 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 PGM3O95394 542 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 PABPC4LP0CB38 370 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 STMN1P16949 149 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 EDNRAP25101 427 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 IVDP26440 423 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 CARD18P57730 90 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 CHRNB3Q05901 458 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 C17orf67Q0P5P2 114 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 CSTF3Q12996 717 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 RNPS1Q15287 305 aaKnown RBP9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 PPP1R7Q15435 360 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZKSCAN8Q15776 578 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 PDCD2Q16342 344 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF239Q16600 458 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms