RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 UTS2O95399 124 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 IL33O95760 270 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 ANGPTL1O95841 491 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 IGKV1D-16P01601 117 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 TIA1P31483 386 aaKnown RBP eCLIP13.83□□□□□ -0.2
PALB2-205ENST00000567003 HSD17B3P37058 310 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 NCBP2P52298 156 aaKnown RBP eCLIP13.83□□□□□ -0.23e-6■■□□□ 14.4
PALB2-205ENST00000567003 PSPHP78330 225 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 FAPQ12884 760 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 DECR1Q16698 335 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 GRAMD1BQ3KR37 738 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 CYP27C1Q4G0S4 372 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 SLC9A6Q92581 669 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 S100PBPQ96BU1 408 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 ADGRG7Q96K78 797 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 KLHDC3Q9BQ90 382 aa13.83□□□□□ -0.2
PALB2-205ENST00000567003 SVEP1Q4LDE5 3571 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 MYO1GB0I1T2 1018 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 OVOL3O00110 214 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 UPK1AO00322 258 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 TNFSF11O14788 317 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 CD5LO43866 347 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 TMCC2O75069 709 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 ADAM11O75078 769 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 IGHV4-39P01824 125 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 TP53P04637 393 aaPredicted RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 DANCRP0C864 163 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 MPIP34949 423 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 SLC7A5Q01650 507 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 OCRLQ01968 901 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 CLCQ05315 142 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 CSTF3Q12996 717 aaKnown RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 GLYR1Q49A26 553 aaPredicted RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 UNC50Q53HI1 259 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 MFSD12Q6NUT3 480 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 SAMD14Q8IZD0 417 aaPredicted RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 TMEM151AQ8N4L1 468 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 GATSQ8NAP1 163 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 KBTBD8Q8NFY9 601 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 PIK3R3Q92569 461 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 GTPBP3Q969Y2 492 aaKnown RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 KCNA7Q96RP8 456 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 MRPL57Q9BQC6 102 aaKnown RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 TBL1XR1Q9BZK7 514 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 RAB17Q9H0T7 212 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 MRPL46Q9H2W6 279 aaKnown RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 SLCO5A1Q9H2Y9 848 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 ACSS3Q9H6R3 686 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 Q9N2J8 555 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 C19orf53Q9UNZ5 99 aaPredicted RBP13.82□□□□□ -0.2
PALB2-205ENST00000567003 RNF115Q9Y4L5 304 aa13.82□□□□□ -0.2
PALB2-205ENST00000567003 IGLV3-32A0A0A0MS00 114 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 PSMG1O95456 288 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 SYNGR4O95473 234 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 KRT6AP02538 564 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 KRT6BP04259 564 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 HSD3B1P14060 373 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 IL11P20809 199 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 HSD3B2P26439 372 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 HMOX2P30519 316 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 AGTR1P30556 359 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 IDUAP35475 653 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 KRT6CP48668 564 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 CLK3P49761 638 aaKnown RBP13.81□□□□□ -0.2
PALB2-205ENST00000567003 ACSM2AQ08AH3 577 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 HEPACAMQ14CZ8 416 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 TSNAXIP1Q2TAA8 658 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 ACSM2BQ68CK6 577 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 PODNL1Q6PEZ8 512 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 BEND4Q6ZU67 534 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 HIPK1Q86Z02 1210 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 METTL6Q8TCB7 284 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 SMAP2Q8WU79 429 aaPredicted RBP13.81□□□□□ -0.2
PALB2-205ENST00000567003 ROBO4Q8WZ75 1007 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 FBXW5Q969U6 566 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 ZBED6CLQ96FA7 236 aaPredicted RBP13.81□□□□□ -0.2
PALB2-205ENST00000567003 RNF145Q96MT1 663 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 TACO1Q9BSH4 297 aaKnown RBP13.81□□□□□ -0.2
PALB2-205ENST00000567003 C1QTNF3Q9BXJ4 246 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 GLIPR2Q9H4G4 154 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 EQTNQ9NQ60 294 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 DDX18Q9NVP1 670 aaKnown RBP13.81□□□□□ -0.2
PALB2-205ENST00000567003 GDF2Q9UK05 429 aaPredicted RBP13.81□□□□□ -0.2
PALB2-205ENST00000567003 MCTS1Q9ULC4 181 aaKnown RBP13.81□□□□□ -0.2
PALB2-205ENST00000567003 PYCARDQ9ULZ3 195 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 LIPT1Q9Y234 373 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 GPR52Q9Y2T5 361 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 TIMM22Q9Y584 194 aa13.81□□□□□ -0.2
PALB2-205ENST00000567003 A0A087WV62 115 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 A0A0J9YW62 118 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 TRIM49D1C9J1S8 452 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 ULK1O75385 1050 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 GCM2O75603 506 aaPredicted RBP13.8□□□□□ -0.2
PALB2-205ENST00000567003 SUPT7LO94864 414 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 INHBAP08476 426 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 ANXA4P09525 319 aaPredicted RBP13.8□□□□□ -0.2
PALB2-205ENST00000567003 PSMB1P20618 241 aaKnown RBP13.8□□□□□ -0.2
PALB2-205ENST00000567003 DDCP20711 480 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 SHC1P29353 583 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms