RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 MBOAT2Q6ZWT7 520 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 NRROSQ86YC3 692 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 PEX5LQ8IYB4 626 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 GIMAP5Q96F15 307 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 FAM46AQ96IP4 442 aaKnown RBP15.65■□□□□ 0.1
CMTM3-213ENST00000566756 FRMD6Q96NE9 622 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 ZNF649Q9BS31 505 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 OSGEPL1Q9H4B0 414 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 XKR8Q9H6D3 395 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 PPP1R3EQ9H7J1 279 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 RNF121Q9H920 327 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 POLMQ9NP87 494 aaPredicted RBP15.65■□□□□ 0.1
CMTM3-213ENST00000566756 PRDM9Q9NQV7 894 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 DDX28Q9NUL7 540 aaKnown RBP15.65■□□□□ 0.1
CMTM3-213ENST00000566756 USP36Q9P275 1121 aaKnown RBP15.65■□□□□ 0.1
CMTM3-213ENST00000566756 CLCA2Q9UQC9 943 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 GPR52Q9Y2T5 361 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 YARS2Q9Y2Z4 477 aaKnown RBP15.65■□□□□ 0.1
CMTM3-213ENST00000566756 CHST2Q9Y4C5 530 aa15.65■□□□□ 0.1
CMTM3-213ENST00000566756 TTC36A6NLP5 189 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 IGLV3-19P01714 112 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 MYL9P24844 172 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 ACSL1P33121 698 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 RCVRNP35243 200 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 MC3RP41968 323 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF155Q12901 538 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 KRT33BQ14525 404 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CDK10Q15131 360 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 UAP1L1Q3KQV9 507 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 PYDC2Q56P42 97 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 MZT2AQ6P582 158 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF620Q6ZNG0 422 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 C16orf62Q7Z3J2 963 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 VRK2Q86Y07 508 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 TM9SF2Q99805 663 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CACYBPQ9HB71 228 aaKnown RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CTPS2Q9NRF8 586 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CNIH4Q9P003 139 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 ADAM30Q9UKF2 790 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 HEBP2Q9Y5Z4 205 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CDH10Q9Y6N8 788 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CPSF4LA6NMK7 179 aaKnown RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CHURC1-FNTBB4DL54 471 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CASKO14936 926 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 PLA2G10O15496 165 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CHRNB1P11230 501 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CPN2P22792 545 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 TCEA1P23193 301 aaKnown RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 CERS1P27544 350 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 RGS8P57771 180 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 TAB1Q15750 504 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 C18orf63Q68DL7 685 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 TYW3Q6IPR3 259 aaKnown RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 Q8N9G6 341 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 DUSP18Q8NEJ0 188 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 OR4Q3Q8NH05 313 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 DNAJA4Q8WW22 397 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 QRSL1Q9H0R6 528 aaKnown RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 KIR3DX1Q9H7L2 352 aa15.64■□□□□ 0.09
CMTM3-213ENST00000566756 MTHFD2LQ9H903 347 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 GPR55Q9Y2T6 319 aaPredicted RBP15.64■□□□□ 0.09
CMTM3-213ENST00000566756 LATO43561 262 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 GNSP15586 552 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 TRHRP34981 398 aaPredicted RBP15.63■□□□□ 0.09
CMTM3-213ENST00000566756 EVX1P49640 407 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 QPRTQ15274 297 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.63■□□□□ 0.09
CMTM3-213ENST00000566756 FAM214AQ32MH5 1076 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF750Q32MQ0 723 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 MZT2BQ6NZ67 158 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 CDC73Q6P1J9 531 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 PLEKHM3Q6ZWE6 761 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 SYT13Q7L8C5 426 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 GID4Q8IVV7 300 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF687Q8N1G0 1237 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 ASCC1Q8N9N2 400 aaKnown RBP15.63■□□□□ 0.09
CMTM3-213ENST00000566756 SYT14Q8NB59 555 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 OR2T33Q8NG76 320 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 OR9A2Q8NGT5 310 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 ADAMTS15Q8TE58 950 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 ACOT12Q8WYK0 555 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 GAL3ST3Q96A11 431 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 SLC41A3Q96GZ6 507 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 MS4A4EQ96PG1 132 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 ATF6BQ99941 703 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 TRAF4Q9BUZ4 470 aaPredicted RBP15.63■□□□□ 0.09
CMTM3-213ENST00000566756 FN3KQ9H479 309 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 CD93Q9NPY3 652 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 TOR4AQ9NXH8 423 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 PHF11Q9UIL8 331 aa15.63■□□□□ 0.09
CMTM3-213ENST00000566756 NDRG2Q9UN36 371 aaKnown RBP15.63■□□□□ 0.09
CMTM3-213ENST00000566756 J3QRE1 110 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 SCO2O43819 266 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 YES1P07947 543 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 ALPPL2P10696 532 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 HNRNPA2B1P22626 353 aaKnown RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 RNF144AP50876 292 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 MRPS15P82914 257 aaKnown RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 EIPR1Q53HC9 387 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 TIGD3Q6B0B8 471 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms