RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ACLYP53396 1101 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 PEX3P56589 373 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 OR1D5P58170 312 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 DAOAP59103 153 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ABCE1P61221 599 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CSNK2BP67870 215 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 NTHL1P78549 312 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 COL10A1Q03692 680 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RGS1Q08116 209 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC10A2Q12908 348 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SLAQ13239 276 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MAB21L1Q13394 359 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 XRCC4Q13426 336 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ENPP2Q13822 863 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 GK3PQ14409 553 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 GPR176Q14439 515 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ATXN7L3Q14CW9 347 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 UBE2V2Q15819 145 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MTHFSDQ2M296 383 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM83EQ2M2I3 478 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 TP53I3Q53FA7 332 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 XKR6Q5GH73 641 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ATP1A1-AS1Q5TC04 95 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MLIPQ5VWP3 458 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF772Q68DY9 489 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC8B1Q6J4K2 584 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC25A25Q6KCM7 469 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC18B1Q6NT16 456 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SHC4Q6S5L8 630 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 UTS2BQ765I0 119 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 H2BFWTQ7Z2G1 175 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 YTHDF3Q7Z739 585 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MOB3BQ86TA1 216 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SPATA24Q86W54 205 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 PRIMA1Q86XR5 153 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RNF130Q86XS8 419 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 FBXL16Q8N461 479 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 POC1AQ8NBT0 407 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SEMA6DQ8NFY4 1073 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 OR1B1Q8NGR6 318 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RHEBL1Q8TAI7 183 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 FAM110BQ8TC76 370 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 LRRC20Q8TCA0 184 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 CD300LFQ8TDQ1 290 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 GLYATL2Q8WU03 294 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 OR1E3Q8WZA6 343 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 NRGNQ92686 78 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ART4Q93070 314 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ADIPOR1Q96A54 375 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RTP4Q96DX8 246 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 C17orf77Q96MU5 243 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MTMR9Q96QG7 549 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 IL4I1Q96RQ9 567 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 LPAR4Q99677 370 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 LLPHQ9BRT6 129 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 PINK1Q9BXM7 581 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 ANKRD60Q9BZ19 345 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RBM38Q9H0Z9 239 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC25A51Q9H1U9 297 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 TDRD3Q9H7E2 651 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MTHFD2LQ9H903 347 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 NRN1Q9NPD7 142 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 C20orf96Q9NUD7 363 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 DCAF13Q9NV06 445 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 HIF1ANQ9NWT6 349 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 TEX10Q9NXF1 929 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 TUBA8Q9NY65 449 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SMARCAL1Q9NZC9 954 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 EIF3KQ9UBQ5 218 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 PRDM4Q9UKN5 801 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RNF24Q9Y225 148 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 RNF6Q9Y252 685 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MAP3K4Q9Y6R4 1608 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 UHRF1BP1Q6BDS2 1440 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 AFF2P51816 1311 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 MAP3K19Q56UN5 1328 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 SALL1Q9NSC2 1324 aa2.93□□□□□ -1.94
HERPUD1-211ENST00000566550 IGLV5-39A0A0G2JS06 123 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 LOC390937A0A1W2PQ73 354 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ASPDHA6ND91 283 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 LRIT2A6NDA9 550 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 TCP10L2B9ZVM9 353 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF587BE7ETH6 402 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 LMO7DNF2Z398 122 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 OR7A17O14581 309 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 EI24O14681 340 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 CTSVO60911 334 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 DUSP11O75319 330 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF254O75437 659 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 B3GAT3O94766 335 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 CLDN9O95484 217 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 POP4O95707 220 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 PMS2P2O95744 297 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 F10P00742 488 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 APOA1P02647 267 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 OPN1LWP04000 364 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 GAPDHP04406 335 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 NEFHP12036 1026 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF3P17036 446 aa2.92□□□□□ -1.94
HERPUD1-211ENST00000566550 EIF2S2P20042 333 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms