RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 NDRG3Q9UGV2 375 aa15.52■□□□□ 0.08
VPS9D1-203ENST00000563798 TESMINQ9Y4I5 508 aa15.52■□□□□ 0.08
VPS9D1-203ENST00000563798 ABCA4P78363 2273 aa15.52■□□□□ 0.07
VPS9D1-203ENST00000563798 EMC8O43402 210 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 NPHS1O60500 1241 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 ANGPTL1O95841 491 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 CHEK2O96017 543 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 CGAP01215 116 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 KLK2P20151 261 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 TCEA1P23193 301 aaKnown RBP15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 ASMTP46597 345 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 HSPB3Q12988 150 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 STX5Q13190 355 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 MLC1Q15049 377 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 DEFB113Q30KQ7 82 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 GRAMD1BQ3KR37 738 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 ZCCHC12Q6PEW1 402 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 P4HA3Q7Z4N8 544 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 RIBC1Q8N443 379 aaPredicted RBP15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 BANPQ8N9N5 519 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 GPR151Q8TDV0 419 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 FIG4Q92562 907 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 GFM2Q969S9 779 aaKnown RBP15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 CIDECQ96AQ7 238 aaPredicted RBP15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 TBL1XR1Q9BZK7 514 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 DLL4Q9NR61 685 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 ZFHX3Q15911 3703 aa15.51■□□□□ 0.07
VPS9D1-203ENST00000563798 A0A087WZY1 265 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 A0A1W2PPR1 153 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 C7orf72A4D263 438 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 SMIM23A6NLE4 172 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 H0YC42 278 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 CD8BP10966 210 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 FOSL1P15407 271 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 ZNF17P17021 662 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 TBXA2RP21731 343 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 GPC1P35052 558 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 CD79BP40259 229 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 MANFP55145 182 aaKnown RBP15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 TPD52P55327 224 aaPredicted RBP15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 CLDN20P56880 219 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 RPL38P63173 70 aaKnown RBP15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 FBXW10Q5XX13 1052 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 ANKRD26P1Q6NSI1 321 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 VWA1Q6PCB0 445 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 ZNF474Q6S9Z5 364 aaPredicted RBP15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 LRIG3Q6UXM1 1119 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 BTLAQ7Z6A9 289 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 TRABD2AQ86V40 505 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 UBQLNLQ8IYU4 475 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 NUP43Q8NFH3 380 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 OR6Y1Q8NGX8 325 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 OR4C3Q8NH37 302 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 PIK3R3Q92569 461 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 APOPT1Q96IL0 206 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 MS4A4EQ96PG1 132 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 TSSK3Q96PN8 268 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 PINK1Q9BXM7 581 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 GIN1Q9NXP7 522 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 ELOVL5Q9NYP7 299 aa15.5■□□□□ 0.07
VPS9D1-203ENST00000563798 ZNF469Q96JG9 3925 aaPredicted RBP15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 CASKO14936 926 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 CTIFO43310 598 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 AKAP10O43572 662 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 NUDT17P0C025 328 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 LINC00032P0C843 101 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 ACP2P11117 423 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 BCKDHAP12694 445 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 DDX5P17844 614 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 ALDH3A1P30838 453 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 RPS3AP61247 264 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 PPP2R2AP63151 447 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 ADAM8P78325 824 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 FAM27E3Q08E93 113 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 KEAP1Q14145 624 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 MFSD12Q6NUT3 480 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 R3HCC1LQ7Z5L2 792 aaKnown RBP15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 GGNQ86UU5 652 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 EXOC3L1Q86VI1 746 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 SLC16A11Q8NCK7 471 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 ACTRT2Q8TDY3 377 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 PGM2Q96G03 612 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 EQTNQ9NQ60 294 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 SH3BP4Q9P0V3 963 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 STOML1Q9UBI4 398 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 BAIAP2L1Q9UHR4 511 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 LGALS13Q9UHV8 139 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 ATP6V1HQ9UI12 483 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 TRAF6Q9Y4K3 522 aa15.49■□□□□ 0.07
VPS9D1-203ENST00000563798 PCNX3Q9H6A9 2034 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 A0A1W2PQD3 144 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 H3BML4 177 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 KCNK2O95069 426 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 OXSR1O95747 527 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 HSPA4LO95757 839 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 CHRNGP07510 517 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 FCGR2AP12318 317 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 CD53P19397 219 aa15.48■□□□□ 0.07
VPS9D1-203ENST00000563798 PSMA4P25789 261 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms