RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 PRR22Q8IZ63 422 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 AMER2Q8N7J2 671 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 C17orf47Q8NEP4 570 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 OR6T1Q8NGN1 323 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 WFDC6Q9BQY6 131 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 ARMC7Q9H6L4 198 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 C8orf4Q9NR00 106 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 FARSAQ9Y285 508 aaKnown RBP20.27■□□□□ 0.84
LINC01960-201ENST00000563759 IGHV1-45A0A0A0MS14 117 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 DPM1O60762 260 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 DNAJA1P31689 397 aaKnown RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 RNF144AP50876 292 aaPredicted RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 CDH12P55289 794 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 RGS8P57771 180 aaPredicted RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 EEF1A1P68104 462 aaKnown RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 PLCXD2Q0VAA5 305 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 GANABQ14697 944 aaKnown RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 MRPL2Q5T653 305 aaKnown RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 RNF220Q5VTB9 566 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 PPP4R4Q6NUP7 873 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 CLIP4Q8N3C7 705 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 PACRGLQ8N7B6 248 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 CHST2Q9Y4C5 530 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 SLC30A4O14863 429 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 FRS3O43559 492 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 RAD1O60671 282 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 FPR1P21462 350 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 IL12BP29460 328 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 STAT5AP42229 794 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 DNASE1L3Q13609 305 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 BTBD16Q32M84 506 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 AP1ARQ63HQ0 302 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 TCTN3Q6NUS6 607 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 SHQ1Q6PI26 577 aaKnown RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 TMEM179BQ7Z7N9 219 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 HIPK1Q86Z02 1210 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 ZNF441Q8N8Z8 693 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 HSPBAP1Q96EW2 488 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 EPYCQ99645 322 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 ARHGDIGQ99819 225 aa20.26■□□□□ 0.83
LINC01960-201ENST00000563759 MAGED1Q9Y5V3 778 aaPredicted RBP20.26■□□□□ 0.83
LINC01960-201ENST00000563759 TO15178 435 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 IL33O95760 270 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 COX6A1P12074 109 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 RBMS1P29558 406 aaKnown RBP20.25■□□□□ 0.83
LINC01960-201ENST00000563759 OTX2P32243 289 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 DLSTP36957 453 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 ATP12AP54707 1039 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 PSPHP78330 225 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 TAF11Q15544 211 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 HS3ST5Q8IZT8 346 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 MAGEE2Q8TD90 523 aaPredicted RBP20.25■□□□□ 0.83
LINC01960-201ENST00000563759 THAP3Q8WTV1 239 aaPredicted RBP20.25■□□□□ 0.83
LINC01960-201ENST00000563759 ADAMTS14Q8WXS8 1223 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 ZNF700Q9H0M5 742 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 LIN28AQ9H9Z2 209 aaKnown RBP20.25■□□□□ 0.83
LINC01960-201ENST00000563759 RHCGQ9UBD6 479 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 LYVE1Q9Y5Y7 322 aa20.25■□□□□ 0.83
LINC01960-201ENST00000563759 C21orf140B9A014 251 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 TNFRSF11BO00300 401 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 GFRA3O60609 400 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 REM1O75628 298 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 NRG3P56975 720 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 LAPTM4AQ15012 233 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 TBPL2Q6SJ96 375 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 TAGAPQ8N103 731 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 SLC34A3Q8N130 599 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 OR5L2Q8NGL0 311 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 OR8K3Q8NH51 312 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 OR52J3Q8NH60 311 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 NUBPLQ8TB37 319 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 DIO2Q92813 273 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 TP53INP1Q96A56 240 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 CDHR4A6H8M9 788 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 GADD45GO95257 159 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 HPGDP15428 266 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 ABCD3P28288 659 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 ZNF141Q15928 474 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 EXT1Q16394 746 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 KIRREL2Q6UWL6 708 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 ZNF605Q86T29 641 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 ZNF527Q8NB42 609 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 OR11G2Q8NGC1 345 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 PHF10Q8WUB8 498 aaKnown RBP20.24■□□□□ 0.83
LINC01960-201ENST00000563759 OMA1Q96E52 524 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 ADOQ96SZ5 270 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 LRRC42Q9Y546 428 aa20.24■□□□□ 0.83
LINC01960-201ENST00000563759 NSG1A0A0A6YYJ2 146 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 H0YJX3 145 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 SOCS6O14544 535 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 FFAR1O14842 300 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 SEMA7AO75326 666 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 HSPA13P48723 471 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 FOXD4Q12950 439 aaPredicted RBP20.23■□□□□ 0.83
LINC01960-201ENST00000563759 DAG1Q14118 895 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 NPTX1Q15818 432 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 HEATR5AQ86XA9 2040 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 GPR87Q9BY21 358 aa20.23■□□□□ 0.83
LINC01960-201ENST00000563759 PDP1Q9P0J1 537 aaPredicted RBP20.23■□□□□ 0.83
LINC01960-201ENST00000563759 KCND3Q9UK17 655 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms