RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FAF1Q9UNN5 650 aaPredicted RBP7.78□□□□□ -1.16
UBR1-204ENST00000563239 ABCG2Q9UNQ0 655 aa7.78□□□□□ -1.16
UBR1-204ENST00000563239 IGLV3-32A0A0A0MS00 114 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 TRGV5A0A0B4J1U4 118 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 NPIPA5A0A0B4J1W7 369 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 A0A1B0GUH1 482 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 OR14I1A6ND48 311 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 ALG1L2C9J202 215 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 NPIPA2E9PIF3 369 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 NPIPA7E9PJI5 369 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 NPIPA3F8WFD2 350 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 ZIC3O60481 467 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 FCMRO60667 390 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 CBR3O75828 277 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 TRAPPC6AO75865 159 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 OXSR1O95747 527 aaPredicted RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 KRT16P08779 473 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 ZCCHC18P0CG32 403 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 NPIPA8P0DM63 369 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 OR12D1P0DN82 309 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 ABOP16442 354 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 CAPN3P20807 821 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 LCN1P31025 176 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 PSMD4P55036 377 aaKnown RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 B3GALT5-AS1P59052 145 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 ADORA2A-AS1P86434 159 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 LRRC74AQ0VAA2 488 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 MAPK11Q15759 364 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 CD226Q15762 336 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 GXYLT1Q4G148 440 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 TIGD2Q4W5G0 525 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 WIPI1Q5MNZ9 446 aaPredicted RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 COX20Q5RI15 118 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 DCST1Q5T197 706 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 DCST2Q5T1A1 773 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.77□□□□□ -1.17
UBR1-204ENST00000563239 RTL6Q6ICC9 239 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 BHLHB9Q6PI77 547 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 SLC2A7Q6PXP3 512 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 C3P1Q6ZMU1 363 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 ZNF621Q6ZSS3 439 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 MSANTD1Q6ZTZ1 278 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 NCCRP1Q6ZVX7 275 aaPredicted RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 YRDCQ86U90 279 aaKnown RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 CD163Q86VB7 1156 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 RPRMLQ8N4K4 120 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 MARVELD2Q8N4S9 558 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 FAM83FQ8NEG4 500 aaPredicted RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 OR2M3Q8NG83 312 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 NEIL3Q8TAT5 605 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 ZFP90Q8TF47 636 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 DUSP19Q8WTR2 217 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 SSC4DQ8WTU2 575 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 RAB8BQ92930 207 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 CCDC120Q96HB5 630 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 SLC35G5Q96KT7 338 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 PANX1Q96RD7 426 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 DMRTA2Q96SC8 542 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 SIKE1Q9BRV8 207 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 PAIP1Q9H074 479 aaKnown RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 OR51I1Q9H343 314 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 PNPLA3Q9NST1 481 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 TMEM45AQ9NWC5 275 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 MED11Q9P086 117 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 SLAMF8Q9P0V8 285 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 B4GALT7Q9UBV7 327 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 KCNE5Q9UJ90 142 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 SH3BGRL2Q9UJC5 107 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 MEMO1Q9Y316 297 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 SLC6A5Q9Y345 797 aa7.77□□□□□ -1.17
UBR1-204ENST00000563239 MRPS18CQ9Y3D5 142 aaKnown RBP7.77□□□□□ -1.17
UBR1-204ENST00000563239 TRBV5-3A0A0A0MS03 114 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 A0A0G2JND7 137 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 CENPVL1A0A0U1RR11 272 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 HMGN4O00479 90 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 CCL21O00585 134 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 RFXANKO14593 260 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 GPR37O15354 613 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 OIP5O43482 229 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 ZG16O60844 167 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 SOX30O94993 753 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 ANGPTL1O95841 491 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 TPOP07202 933 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 BMP7P18075 431 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 SRD5A2P31213 254 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 RNF144AP50876 292 aaPredicted RBP7.76□□□□□ -1.17
UBR1-204ENST00000563239 GFRA1P56159 465 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 IRX1P78414 480 aaPredicted RBP7.76□□□□□ -1.17
UBR1-204ENST00000563239 CRYZQ08257 329 aaKnown RBP7.76□□□□□ -1.17
UBR1-204ENST00000563239 SF3A3Q12874 501 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBR1-204ENST00000563239 STX5Q13190 355 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 SQLEQ14534 574 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 ARHGAP11BQ3KRB8 267 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 AGKQ53H12 422 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 KLHL26Q53HC5 615 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 NHSL2Q5HYW2 709 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 PAGE3Q5JUK9 113 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 VASNQ6EMK4 673 aa7.76□□□□□ -1.17
UBR1-204ENST00000563239 TNFAIP8L2Q6P589 184 aaPredicted RBP7.76□□□□□ -1.17
UBR1-204ENST00000563239 DNAJC14Q6Y2X3 702 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms