RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CCT7Q99832 543 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 ATF6BQ99941 703 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 HSD17B14Q9BPX1 270 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 ANP32EQ9BTT0 268 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 ST6GALNAC5Q9BVH7 336 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 UBXN6Q9BZV1 441 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 TRIM9Q9C026 710 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 TRIM6Q9C030 488 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 MAGT1Q9H0U3 335 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 POLR3FQ9H1D9 316 aaPredicted RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 COG4Q9H9E3 785 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 MBD2Q9UBB5 411 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 GNG12Q9UBI6 72 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 PRODH2Q9UF12 536 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 MRPS7Q9Y2R9 242 aaKnown RBP2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 KIF16BQ96L93 1317 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 CCDC7Q96M83 1385 aa2.61□□□□□ -1.99
SHCBP1-202ENST00000563219 RNF212BA8MTL3 300 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 CTAGE5O15320 804 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 GPRIN2O60269 458 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 SNNO75324 88 aaPredicted RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 FRAT2O75474 233 aaPredicted RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 SURF6O75683 361 aaKnown RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 RHOBTB1O94844 696 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 TOXO94900 526 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 NUDT14O95848 222 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 F10P00742 488 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 JCHAINP01591 159 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 ALPIP09923 528 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 NCK1P16333 377 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 CALB2P22676 271 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 PSMA2P25787 234 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 SHC1P29353 583 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 SPRP35270 261 aaPredicted RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 ETV5P41161 510 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 GSK3BP49841 420 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 CSRP3P50461 194 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 RIDAP52758 137 aaKnown RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 PLA2G16P53816 162 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 RPS6P62753 249 aaKnown RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 MS4A2Q01362 244 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 PEX6Q13608 980 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 CUL1Q13616 776 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 SLC10A1Q14973 349 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 C14orf28Q4W4Y0 310 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 TAF3Q5VWG9 929 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 ZSCAN25Q6NSZ9 544 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 LEG1Q6P5S2 330 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 C16orf62Q7Z3J2 963 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 TMEM17Q86X19 198 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 RNF130Q86XS8 419 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 VSTM4Q8IW00 320 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 ABHD12Q8N2K0 398 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 OR5AU1Q8NGC0 362 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 OR5L2Q8NGL0 311 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 FBXO32Q969P5 355 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 FAM173AQ9BQD7 235 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 CHCHD5Q9BSY4 110 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 NXF5Q9H1B4 397 aaKnown RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 MEPEQ9NQ76 525 aaPredicted RBP2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 AIPL1Q9NZN9 384 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 COX16Q9P0S2 106 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 ANAPC7Q9UJX3 599 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 RARRES3Q9UL19 164 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 GSTK1Q9Y2Q3 226 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 MEMO1Q9Y316 297 aa2.6□□□□□ -1.99
SHCBP1-202ENST00000563219 ATP10DQ9P241 1426 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 NPIPA5A0A0B4J1W7 369 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 PPIAL4CA0A0B4J2A2 164 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ESYT2A0FGR8 921 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ARHGEF35A5YM69 484 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 NPIPA5E9PKD4 350 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 CLDN5O00501 218 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 CXCL11O14625 94 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 PRRG1O14668 218 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 NUDT21O43809 227 aaKnown RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 B3GAT3O94766 335 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ADCY5O95622 1261 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 CA1P00915 261 aaPredicted RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 IGHV3-13P01766 116 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 IGHG1P01857 330 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 OPN1MWP04001 364 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 IGF1P05019 195 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 PPIAL4GP0DN37 164 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 OPN1MW2P0DN77 364 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 OPN1MW3P0DN78 364 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 GATA1P15976 413 aaPredicted RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 SDC1P18827 310 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 TPSB2P20231 275 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 GDI1P31150 447 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 OTX2P32243 289 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 RPL4P36578 427 aaKnown RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 GNPDA1P46926 289 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 NOVP48745 357 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 STK19P49842 368 aaPredicted RBP2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ARHGDIAP52565 204 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 NTHL1P78549 312 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 ACY1Q03154 408 aa2.59□□□□□ -1.99
SHCBP1-202ENST00000563219 DDX39BQ13838 428 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms