RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TRABD2BA6NFA1 517 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 SURF4O15260 269 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 DUSP11O75319 330 aaKnown RBP15.44■□□□□ 0.06
TPM1-228ENST00000560975 EOMESO95936 686 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 RB1P06400 928 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 ALPPL2P10696 532 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 AHRP35869 848 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 LRRTM4Q86VH4 590 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 LINC00518Q8N0U6 118 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 TMEM99Q8N816 258 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 ARL14EPQ8N8R7 260 aaPredicted RBP15.44■□□□□ 0.06
TPM1-228ENST00000560975 CHST14Q8NCH0 376 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 OR51Q1Q8NH59 317 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 SMAP2Q8WU79 429 aaPredicted RBP15.44■□□□□ 0.06
TPM1-228ENST00000560975 SEC22CQ9BRL7 303 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 ALG8Q9BVK2 526 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 SARGQ9BW04 601 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 MGAT4CQ9UBM8 478 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 ICKQ9UPZ9 632 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 NTNG1Q9Y2I2 539 aa15.44■□□□□ 0.06
TPM1-228ENST00000560975 A0A0G2JN53 185 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 CHURC1-FNTBB4DL54 471 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 ACVR1BP36896 505 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 E2F1Q01094 437 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 RGS7BPQ6MZT1 257 aaPredicted RBP15.43■□□□□ 0.06
TPM1-228ENST00000560975 FAM198BQ6UWH4 519 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 C17orf107Q6ZR85 190 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 OR13C5Q8NGS8 318 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 OR56B4Q8NH76 319 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 SLC5A11Q8WWX8 675 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 IL17FQ96PD4 163 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 F2RL3Q96RI0 385 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 SAV1Q9H4B6 383 aaPredicted RBP15.43■□□□□ 0.06
TPM1-228ENST00000560975 HINT3Q9NQE9 182 aaKnown RBP15.43■□□□□ 0.06
TPM1-228ENST00000560975 BABAM2Q9NXR7 383 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 COPZ2Q9P299 210 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 GMDSO60547 372 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 IGHA1P01876 353 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 GAAP10253 952 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 CRHR2Q13324 411 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 ATRAIDQ6UW56 229 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 TFAP2EQ6VUC0 442 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 RPTNQ6XPR3 784 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 MYLIPQ8WY64 445 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 SLC35G5Q96KT7 338 aa15.43■□□□□ 0.06
TPM1-228ENST00000560975 GLTPD2A6NH11 291 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PLPP1O14494 284 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PGRMC2O15173 223 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 MID1O15344 667 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 NFATC1O95644 943 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 ASGR1P07306 291 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 NMBP08949 121 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PPP2R1BP30154 601 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 ACSM1Q08AH1 577 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 TSPAN31Q12999 210 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 CDC73Q6P1J9 531 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PLBD1Q6P4A8 553 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 NXPE4Q6UWF7 544 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 SLC9B2Q86UD5 537 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 UXS1Q8NBZ7 420 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 OR10H4Q8NGA5 316 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 OR5W2Q8NH69 310 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 NRTNQ99748 197 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 CA10Q9NS85 328 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 SEMA4GQ9NTN9 838 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 EXOGQ9Y2C4 368 aaKnown RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 A0A0G2JK05 382 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PRR23D1E9PI22 279 aaPredicted RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 NDUFA2O43678 99 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PEX14O75381 377 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 REM1O75628 298 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PRR23D2P0DMB1 279 aaPredicted RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 PAICSP22234 425 aaKnown RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 ATP5A1P25705 553 aaKnown RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 HOXD10P28358 340 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 RNF144AP50876 292 aaPredicted RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 SLC16A1P53985 500 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PNLIPRP1P54315 467 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 KCNA10Q16322 511 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 POM121L1PQ3SYA9 428 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 CLVS2Q5SYC1 327 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 SHEQ5VZ18 495 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 SLC25A25Q6KCM7 469 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 TMEM220Q6QAJ8 160 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 MRGPREQ86SM8 312 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 KRT78Q8N1N4 520 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 CPXM2Q8N436 756 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 LINC00471Q8N535 108 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 BBS10Q8TAM1 723 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 KCTD12Q96CX2 325 aaKnown RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 FAIM2Q9BWQ8 316 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 CD93Q9NPY3 652 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PFDN2Q9UHV9 154 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PLAGL1Q9UM63 463 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 LRRN3E7EW58 273 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 C1orf105O95561 183 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 APOC3P02656 99 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 CHRM4P08173 479 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 MRPL3P09001 348 aaKnown RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 HTR1FP30939 366 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms