RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 PHF1O43189 567 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 CXCL13O43927 109 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 PCDH7O60245 1069 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 ADAM11O75078 769 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 RBP1P09455 135 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 ME2P23368 584 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 MPIP34949 423 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 SLC6A8P48029 635 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 CDH13P55290 713 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 TRA2BP62995 288 aaKnown RBP9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 HIPK1Q86Z02 1210 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 METTL25Q8N6Q8 603 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 STEAP2Q8NFT2 490 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 OR7G2Q8NG99 324 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 OR10D3Q8NH80 312 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 SMAP2Q8WU79 429 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 ERP27Q96DN0 273 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 REXO5Q96IC2 774 aaKnown RBP9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 ZNF681Q96N22 645 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 SLCO5A1Q9H2Y9 848 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 ESRP2Q9H6T0 727 aaKnown RBP9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 TMEM185BQ9H7F4 350 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 BRF2Q9HAW0 419 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 ZBTB26Q9HCK0 441 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 Q9N2J8 555 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 PLSCR4Q9NRQ2 329 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 VPS29Q9UBQ0 182 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 RNF14Q9UBS8 474 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 NFU1Q9UMS0 254 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 ABCG2Q9UNQ0 655 aa9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 UTP11Q9Y3A2 253 aaKnown RBP9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 MAGED1Q9Y5V3 778 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPB-207ENST00000560492 STX16-NPEPL1H3BU86 382 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 STX16O14662 325 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 TNFSF11O14788 317 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 RAD51CO43502 376 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 FADS1O60427 444 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 SS18L1O75177 396 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 SOX30O94993 753 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 OR4F21O95013 312 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 KRT6AP02538 564 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 KRT6BP04259 564 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 JUNP05412 331 aaKnown RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 FESP07332 822 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 TUBBP07437 444 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 SOD3P08294 240 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 HMOX2P30519 316 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 KRT6CP48668 564 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 NCBP2P52298 156 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 PSMD4P55036 377 aaKnown RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 BTKQ06187 659 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 ACSM2AQ08AH3 577 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 C2orf54Q08AI8 447 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 HEPACAMQ14CZ8 416 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 TSC22D1Q15714 1073 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 GGTA1PQ4G0N0 100 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 CYP27C1Q4G0S4 372 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 TCHHL1Q5QJ38 904 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 PDSS1Q5T2R2 415 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 FAM219BQ5XKK7 198 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 ACSM2BQ68CK6 577 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 LETMD1Q6P1Q0 360 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 TMEM107Q6UX40 140 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 WDR75Q8IWA0 830 aaKnown RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 PLD6Q8N2A8 252 aaKnown RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 CDYL2Q8N8U2 506 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 GATSQ8NAP1 163 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 IGFBPL1Q8WX77 278 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 NEUROG1Q92886 237 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 S100PBPQ96BU1 408 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 RHNO1Q9BSD3 238 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 EBPLQ9BY08 206 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 AMBRA1Q9C0C7 1298 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 MIEF1Q9NQG6 463 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 SLC35C2Q9NQQ7 365 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 DDX18Q9NVP1 670 aaKnown RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 FAM120CQ9NX05 1096 aaKnown RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 PAQR5Q9NXK6 330 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 MCM8Q9UJA3 840 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 GPR52Q9Y2T5 361 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 SNX8Q9Y5X2 465 aa9.38□□□□□ -0.91
CDC42BPB-207ENST00000560492 SSX4O60224 188 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 DLX3O60479 287 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 NDUFS7O75251 213 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 UTS2O95399 124 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 ANGPTL1O95841 491 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 NTSP30990 170 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 ZNF41P51814 821 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 NUDT6P53370 316 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 CAV1Q03135 178 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 ZNF844Q08AG5 666 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 C17orf67Q0P5P2 114 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 GUSBP1Q15486 140 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 STK11Q15831 433 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 TSNAXIP1Q2TAA8 658 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 SPDYAQ5MJ70 313 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 TMEM201Q5SNT2 666 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 HBMQ6B0K9 141 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 GTF2IRD2BQ6EKJ0 949 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms