RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 THAP3Q8WTV1 239 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 TMEM255BQ8WV15 326 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CNOT9Q92600 299 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 C11orf16Q9NQ32 467 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 KLHL28Q9NXS3 571 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CBLCQ9ULV8 474 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 SLC7A7Q9UM01 511 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 IFT52Q9Y366 437 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 HEATR5AQ86XA9 2040 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 IGKV3D-11A0A0A0MRZ8 115 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 D6RAR5 112 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 KPNA4O00629 521 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 AP3D1O14617 1153 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 YKT6O15498 198 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 PIP5K1CO60331 668 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 MAN1A2O60476 641 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ANGPTL1O95841 491 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ZGLP1P0C6A0 271 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CDH2P19022 906 aaPredicted RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ITIH1P19827 911 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CHMP24386 653 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CRHBPP24387 322 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 HOXD12P35452 270 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 RPL5P46777 297 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF136P52737 540 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 NUDT6P53370 316 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 EMP3P54852 163 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 SERTAD2Q14140 314 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 NKAIN1Q4KMZ8 207 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ZCCHC12Q6PEW1 402 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 QSOX2Q6ZRP7 698 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 P3H2Q8IVL5 708 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 IQCF1Q8N6M8 205 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 ZSCAN1Q8NBB4 408 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 GRHL3Q8TE85 626 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 OR1F2PQ96R84 312 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 LMF2Q9BU23 707 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 NUDT9Q9BW91 350 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CCDC90BQ9GZT6 254 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 NXF5Q9H1B4 397 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 CACYBPQ9HB71 228 aaKnown RBP10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 Q9N2J8 555 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 SATB2Q9UPW6 733 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 RNF6Q9Y252 685 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 POFUT2Q9Y2G5 429 aa10.06□□□□□ -0.8
SNRPA1-211ENST00000560433 A0A1W2PRQ8 180 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 PMS2P1A4D2B8 440 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 H3BSA7 217 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 SLC1A7O00341 560 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 GNB5O14775 395 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 TOX3O15405 576 aaPredicted RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 CNOT3O75175 753 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 SLITRK5O94991 958 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 LDOC1O95751 146 aaPredicted RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DDAH2O95865 285 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 NID1P14543 1247 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 FUT1P19526 365 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 CSTF2P33240 577 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DBPQ10586 325 aaPredicted RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 SQSTM1Q13501 440 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DGCR6Q14129 220 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DHRS4L2Q6PKH6 230 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 RBM44Q6ZP01 1051 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 GDF7Q7Z4P5 450 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 CCDC103Q8IW40 242 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 CACTIN-AS1Q8N1I8 211 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 MORN4Q8NDC4 146 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF721Q8TF20 911 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 APH1BQ8WW43 257 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DIO2Q92813 273 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 C8orf44Q96CB5 159 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 FAM46AQ96IP4 442 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 HRASLS5Q96KN8 279 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DHRS1Q96LJ7 313 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 FUZQ9BT04 418 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 GABARAPL3Q9BY60 117 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 YIPF3Q9GZM5 350 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 SAP130Q9H0E3 1048 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DSN1Q9H410 356 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 TCRBV16S1A1N1A0A5B0 115 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 CDHR4A6H8M9 788 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 SYT5O00445 386 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 FAAHO00519 579 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 DBIP07108 87 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 ANKRD34CP0C6C1 535 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 MSL3P1P0C860 447 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 ALDH6A1Q02252 535 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 KEAP1Q14145 624 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF528Q3MIS6 628 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 KCTD21Q4G0X4 260 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF730Q6ZMV8 503 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 WDR88Q6ZMY6 472 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 KCTD8Q6ZWB6 473 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 MED25Q71SY5 747 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 BCDIN3DQ7Z5W3 292 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 RABEPKQ7Z6M1 372 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 SLC41A3Q96GZ6 507 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 POLR2J3Q9H1A7 115 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 EGLN3Q9H6Z9 239 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms