RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DCST2Q5T1A1 773 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 C6orf163Q5TEZ5 329 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 BICRALQ6AI39 1079 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 CDC73Q6P1J9 531 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 PGM2L1Q6PCE3 622 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ENPP6Q6UWR7 440 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 MED25Q71SY5 747 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 NET1Q7Z628 596 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 MICU2Q8IYU8 434 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 SAMD14Q8IZD0 417 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 LGI4Q8N135 537 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 TRIML2Q8N7C3 387 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 COX18Q8N8Q8 333 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ZNF441Q8N8Z8 693 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 B3GNT7Q8NFL0 401 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 OR2T12Q8NG77 320 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 OR5M3Q8NGP4 307 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 OR14A16Q8NHC5 309 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 BRIX1Q8TDN6 353 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 GPR151Q8TDV0 419 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ADAMTS17Q8TE56 1095 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 XAGE5Q8WWM1 108 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 TMBIM1Q969X1 311 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ADIPOR1Q96A54 375 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 KIAA1143Q96AT1 154 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 EFHD2Q96C19 240 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 FBXL20Q96IG2 436 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 IMMP1LQ96LU5 166 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ZNF578Q96N58 590 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 LPAR4Q99677 370 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 HOPXQ9BPY8 73 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 KLHDC3Q9BQ90 382 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ECSITQ9BQ95 431 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 WFDC6Q9BQY6 131 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 LMF2Q9BU23 707 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 TUBB6Q9BUF5 446 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ACTRT3Q9BYD9 372 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ZNF700Q9H0M5 742 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 C1orf21Q9H246 121 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 C3orf14Q9HBI5 128 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 MRGBPQ9NV56 204 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 ANKRD10Q9NXR5 420 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 NTMQ9P121 344 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 MKLN1Q9UL63 735 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 PRPF19Q9UMS4 504 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 FAF1Q9UNN5 650 aaPredicted RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 PADI2Q9Y2J8 665 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 MSRB2Q9Y3D2 182 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 FLNBO75369 2602 aaKnown RBP4.81□□□□□ -1.64
SPG11-220ENST00000559933 CHD6Q8TD26 2715 aa4.81□□□□□ -1.64
SPG11-220ENST00000559933 EXPH5Q8NEV8 1989 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 A0A087WV62 115 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 C15orf38-AP3S2A0A0A6YYH1 394 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 C2orf92A0A1B0GVN3 265 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 TCRBV5S2A0A599 114 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ELOVL7A1L3X0 281 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 A6NL46 340 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 EVPLLA8MZ36 301 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 NPIPB6E9PJ23 425 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 G3V3Y1 287 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CXCR6O00574 342 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 PEX12O00623 359 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 GSTA4O15217 222 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 FRS3O43559 492 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 GMFGO60234 142 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 ATP5HO75947 161 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 OR2J2O76002 312 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 KRT36O76013 467 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 KCNK2O95069 426 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 NKX2-2O95096 273 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 NTN1O95631 604 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 KRT75O95678 551 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 EPPINO95925 133 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 HPP00738 406 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 SERPINA1P01009 418 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ALPPP05187 535 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 TFPTP0C1Z6 253 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CT45A8P0DMV1 189 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CT45A9P0DMV2 189 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 NR2F1P10589 423 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 DDX5P17844 614 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 GGT1P19440 569 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ME2P23368 584 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CD82P27701 267 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CFPP27918 469 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 ITPKBP27987 946 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 PCGF2P35227 344 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 MAP3K8P41279 467 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 PRIM2P49643 509 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 EEFSECP57772 596 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 MRPS22P82650 360 aaKnown RBP4.8□□□□□ -1.64
SPG11-220ENST00000559933 HOXC5Q00444 222 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CDK6Q00534 326 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 LRRC74AQ0VAA2 488 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 CDC20Q12834 499 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 SSPNQ14714 243 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 MAPK14Q16539 360 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 VMACQ2NL98 169 aa4.8□□□□□ -1.64
SPG11-220ENST00000559933 DEFB109BQ30KR1 87 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms