RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 OR52E6Q96RD3 313 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 TBL1XR1Q9BZK7 514 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SLC6A15Q9H2J7 730 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 MED4Q9NPJ6 270 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 TCF7L2Q9NQB0 619 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SERHLQ9NQF3 203 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SDR39U1Q9NRG7 319 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-211ENST00000557623 MRPS18CQ9Y3D5 142 aaKnown RBP11.39□□□□□ -0.59
SLIRP-211ENST00000557623 PCNX3Q9H6A9 2034 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 C15orf38-AP3S2A0A0A6YYH1 394 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 ZG16O60844 167 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 WDR1O75083 606 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 AGR2O95994 175 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 AK1P00568 194 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 IGKV1D-16P01601 117 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 NGFRP08138 427 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 HOXD4P09016 255 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-211ENST00000557623 RNF224P0DH78 156 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 GABRA1P14867 456 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 HPGDP15428 266 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 AGAP20933 346 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 ATP6V1C1P21283 382 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 TBXA2RP21731 343 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 IL12AP29459 219 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 SRD5A2P31213 254 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 TRPC1P48995 793 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 IDH3AP50213 366 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 AQP5P55064 265 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 STX1BP61266 288 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 C17orf67Q0P5P2 114 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 GRAMD1BQ3KR37 738 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 NHSL2Q5HYW2 709 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 FIGNL1Q6PIW4 674 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 XKRXQ6PP77 449 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 PM20D2Q8IYS1 436 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 ZNF808Q8N4W9 903 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-211ENST00000557623 FAM83FQ8NEG4 500 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-211ENST00000557623 OR4K17Q8NGC6 315 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 GOT1L1Q8NHS2 421 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-211ENST00000557623 STON2Q8WXE9 905 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 OTUB1Q96FW1 271 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-211ENST00000557623 OR7D2Q96RA2 312 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 PANX1Q96RD7 426 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 SIKE1Q9BRV8 207 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 HOXD1Q9GZZ0 328 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 PTGES2Q9H7Z7 377 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 UBQLN4Q9NRR5 601 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 PNPLA3Q9NST1 481 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 FLRT3Q9NZU0 649 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 SPRR3Q9UBC9 169 aa11.38□□□□□ -0.59
SLIRP-211ENST00000557623 ALG1L2C9J202 215 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 SCDO00767 359 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ACTL6AO96019 429 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ENDOUP21128 410 aaKnown RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ACVR2AP27037 513 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 PTGER4P35408 488 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 CHI3L1P36222 383 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 MRPL19P49406 292 aaKnown RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ANXA11P50995 505 aaKnown RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 POLR2JP52435 117 aaKnown RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 DGKQP52824 942 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 DSCR4P56555 118 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 TXNL4AP83876 142 aaKnown RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 GANABQ14697 944 aaKnown RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 SF3B4Q15427 424 aaKnown RBP eCLIP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 EIPR1Q53HC9 387 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 EMC4Q5J8M3 183 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 WIPI1Q5MNZ9 446 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 DCST2Q5T1A1 773 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ZNF787Q6DD87 383 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ZNF585AQ6P3V2 769 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 MSANTD1Q6ZTZ1 278 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 MRGPRGQ86SM5 289 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 IFNEQ86WN2 208 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 MISPQ8IVT2 679 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 FADS6Q8N9I5 356 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ZNF527Q8NB42 609 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 OR5M9Q8NGP3 310 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 OR14L1PQ8NHC6 308 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 MIPOL1Q8TD10 442 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 DUSP19Q8WTR2 217 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 ITLN2Q8WWU7 325 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-211ENST00000557623 MARK4Q96L34 752 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 SLC35A5Q9BS91 424 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 RMND5AQ9H871 391 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 EXD2Q9NVH0 621 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 TAS2R10Q9NYW0 307 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 DKKL1Q9UK85 242 aa11.37□□□□□ -0.59
SLIRP-211ENST00000557623 A0A1W2PQD3 144 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 FAM234BA2RU67 622 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 CCDC154A6NI56 674 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 AHRRA9YTQ3 701 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 C9JVG2 144 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 RFXANKO14593 260 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 ADAM10O14672 748 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 NDUFB5O43674 189 aa11.36□□□□□ -0.59
SLIRP-211ENST00000557623 EDF1O60869 148 aaKnown RBP11.36□□□□□ -0.59
SLIRP-211ENST00000557623 OXSR1O95747 527 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms