RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TTC41PQ6P2S7 1318 aa2.64□□□□□ -1.99
TRAV28-201ENST00000557548 CENPJQ9HC77 1338 aaPredicted RBP2.64□□□□□ -1.99
TRAV28-201ENST00000557548 DOCK7Q96N67 2140 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 NPIPA5A0A0B4J1W7 369 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 IGHV3-38A0A0C4DH36 116 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 A0A0U1RQS6 177 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 IGLON5A6NGN9 336 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 NCF1BA6NI72 391 aaPredicted RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PCP4L1A6NKN8 68 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 OR52A4PA6NMU1 304 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 NCF1CA8MVU1 366 aaPredicted RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 NPIPA5E9PKD4 350 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SLCO1B7G3V0H7 640 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PDLIM1O00151 329 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 FOXE1O00358 373 aaPredicted RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PPIHO43447 177 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 KRT36O76013 467 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 POLR2MP0CAP2 368 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 TBXA2RP21731 343 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 GALP22466 123 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 HSD17B2P37059 387 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 BDKRB1P46663 353 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 POU3F4P49335 361 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SEC61GP60059 68 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 ERVK-16P61578 105 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 RPL23AP62750 156 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 NTHL1P78549 312 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SPAG1Q07617 926 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 BST1Q10588 318 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PLD1Q13393 1074 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 IDI1Q13907 227 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 FASTKQ14296 549 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 RAB35Q15286 201 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 RCN1Q15293 331 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 CD226Q15762 336 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 DPYSL2Q16555 572 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 HADHQ16836 314 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 FBXO48Q5FWF7 155 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 ADAMTSL4-AS1Q5T5F5 129 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SEL1L2Q5TEA6 688 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 ACSM5Q6NUN0 579 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 DOK6Q6PKX4 331 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 C3P1Q6ZMU1 363 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 CYS1Q717R9 158 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 CCDC80Q76M96 950 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PRSS48Q7RTY5 328 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 NUFIP2Q7Z417 695 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 CCDC71Q8IV32 467 aaPredicted RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 TTC5Q8N0Z6 440 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 CLDN19Q8N6F1 224 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF781Q8N8C0 355 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 OR4D5Q8NGN0 318 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SPPL2AQ8TCT8 520 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 MIPOL1Q8TD10 442 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 C11orf52Q96A22 123 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 NTNG2Q96CW9 530 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SDSLQ96GA7 329 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 ATXN7L3BQ96GX2 97 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 GMPPAQ96IJ6 420 aaPredicted RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PIWIL1Q96J94 861 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 RPRD1AQ96P16 312 aaPredicted RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 GAL3ST1Q99999 423 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SLC30A2Q9BRI3 323 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 ST6GALNAC5Q9BVH7 336 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PKIBQ9C010 78 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 POLR3FQ9H1D9 316 aaPredicted RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 WDR13Q9H1Z4 485 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 SGK2Q9HBY8 427 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 DEPPQ9NTK1 212 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PLCXD1Q9NUJ7 323 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 QPCTLQ9NXS2 382 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 MRPL39Q9NYK5 338 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 KCNG2Q9UJ96 466 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 EIF3LQ9Y262 564 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 PIGLQ9Y2B2 252 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 EXOGQ9Y2C4 368 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 MRPS28Q9Y2Q9 187 aaKnown RBP2.63□□□□□ -1.99
TRAV28-201ENST00000557548 MEMO1Q9Y316 297 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 FBXO7Q9Y3I1 522 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 MAD1L1Q9Y6D9 718 aa2.63□□□□□ -1.99
TRAV28-201ENST00000557548 TNIKQ9UKE5 1360 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 FAM240BA0A1B0GVZ2 78 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 BTBD17A6NE02 478 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 RNF212BA8MTL3 300 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 HHLA1C9JL84 531 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 TM9SF1O15321 606 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 RNF113AO15541 343 aaKnown RBP2.62□□□□□ -1.99
TRAV28-201ENST00000557548 TIMM8AO60220 97 aaPredicted RBP2.62□□□□□ -1.99
TRAV28-201ENST00000557548 SRPX2O60687 465 aaPredicted RBP2.62□□□□□ -1.99
TRAV28-201ENST00000557548 FRAT2O75474 233 aaPredicted RBP2.62□□□□□ -1.99
TRAV28-201ENST00000557548 SCGNO76038 276 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 F10P00742 488 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 JCHAINP01591 159 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 TPM3P06753 285 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 FCGR3AP08637 254 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 IGFBP1P08833 259 aaPredicted RBP2.62□□□□□ -1.99
TRAV28-201ENST00000557548 H2AFXP16104 143 aaPredicted RBP2.62□□□□□ -1.99
TRAV28-201ENST00000557548 CCKARP32238 428 aa2.62□□□□□ -1.99
TRAV28-201ENST00000557548 RPL4P36578 427 aaKnown RBP2.62□□□□□ -1.99
TRAV28-201ENST00000557548 CCT6AP40227 531 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms