RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 POM121L2Q96KW2 1035 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GPR137Q96N19 417 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ANKRD27Q96NW4 1050 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GAL3ST4Q96RP7 486 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 SLC29A1Q99808 456 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 TSG101Q99816 390 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ZSCAN5AQ9BUG6 496 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 FGFBP2Q9BYJ0 223 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 WDR13Q9H1Z4 485 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 P2RY12Q9H244 342 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 MRPL47Q9HD33 250 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 AGPAT3Q9NRZ7 376 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 STARD5Q9NSY2 213 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 RAB20Q9NX57 234 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 HACD3Q9P035 362 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PEF1Q9UBV8 284 aaKnown RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ARMCX3Q9UH62 379 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-212ENST00000557538 GGA2Q9UJY4 613 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PPP2R2CQ9Y2T4 447 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 PYGO1Q9Y3Y4 419 aa1.45□□□□□ -2.18
HIF1A-212ENST00000557538 ARHGEF11O15085 1522 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 POGZQ7Z3K3 1410 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 VPS8Q8N3P4 1428 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CNTNAP2Q9UHC6 1331 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CDC42BPAQ5VT25 1732 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 DHX57Q6P158 1386 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 A0A0A6YYC8 382 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TRIM49BA6NDI0 452 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SNTNA6NMZ2 147 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SRRM4A7MD48 611 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LINC00587B1AMM8 73 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CENPBD1B2RD01 187 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF732B4DXR9 585 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 E9PBE3 544 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 NPIPB9F8W1W9 429 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 F8WDY8 70 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 H0YIG0 161 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 I3L1I5 382 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SLC28A1O00337 649 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CTDSPLO15194 276 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF264O43296 627 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SCN2BO60939 215 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SMIM24O75264 130 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SUPT3HO75486 399 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CLPXO76031 633 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CD48P09326 243 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ZDHHC11BP0C7U3 371 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SLC2A3P11169 496 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LBPP18428 481 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 LHCGRP22888 699 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CXCR2P25025 360 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 PSMA2P25787 234 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ATP5C1P36542 298 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TGM4P49221 684 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SERPINH1P50454 418 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 HPCAP84074 193 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TSPAN31Q12999 210 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ITGB3BPQ13352 177 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 AQP6Q13520 282 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 PEX6Q13608 980 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 KLHL40Q2TBA0 621 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 HLA-BQ31612 363 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 EPC2Q52LR7 807 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 HSP90AA4PQ58FG1 418 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TEX35Q5T0J7 233 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 RIPPLY2Q5TAB7 128 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ATP1A1-AS1Q5TC04 95 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TMIGD1Q6UXZ0 262 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 DLEU7Q6UYE1 221 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 B3GLCTQ6Y288 498 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CARM1Q86X55 608 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CATSPERDQ86XM0 798 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CDKL3Q8IVW4 592 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 DND1Q8IYX4 353 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 BBS5Q8N3I7 341 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF614Q8N883 585 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 P3H4Q92791 437 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CIDECQ96AQ7 238 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 OMA1Q96E52 524 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC3Q9BQI4 270 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 PIGQQ9BRB3 760 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SIKE1Q9BRV8 207 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 FAM213AQ9BRX8 229 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM175Q9BSA9 504 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 RAB33BQ9H082 229 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 OR51V1Q9H2C8 321 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ECT2Q9H8V3 914 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 DNPEPQ9ULA0 475 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 SATB2Q9UPW6 733 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 CHMP2BQ9UQN3 213 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 HBS1LQ9Y450 684 aaKnown RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 ATG4BQ9Y4P1 393 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 RNF215Q9Y6U7 377 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 R4GN57 208 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 MAP3K1Q13233 1512 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 NCOA1Q15788 1441 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 UBE4BO95155 1302 aa1.44□□□□□ -2.18
HIF1A-212ENST00000557538 POLR1AO95602 1720 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-212ENST00000557538 WDR81Q562E7 1941 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms