RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 OR5D16Q8NGK9 328 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 OR5M9Q8NGP3 310 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 OR14L1PQ8NHC6 308 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 PHF10Q8WUB8 498 aaKnown RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 NEURL3Q96EH8 262 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 CCDC120Q96HB5 630 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ITCHQ96J02 903 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SDF2Q99470 211 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 TIMP4Q99727 224 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SLC35A5Q9BS91 424 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 INPP5KQ9BT40 448 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 RTN4RQ9BZR6 473 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SLC6A15Q9H2J7 730 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 OR51I1Q9H343 314 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 PTGES2Q9H7Z7 377 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 NPHS2Q9NP85 383 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 PNPLA3Q9NST1 481 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 EXD2Q9NVH0 621 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 TMEM45AQ9NWC5 275 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 FBXO34Q9NWN3 711 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 TAS2R10Q9NYW0 307 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SPRR3Q9UBC9 169 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 FBXL2Q9UKC9 423 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 TRIM33Q9UPN9 1127 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 KCNE3Q9Y6H6 103 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SVILO95425 2214 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 IGLV3-32A0A0A0MS00 114 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 C15orf38-AP3S2A0A0A6YYH1 394 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 AHRRA9YTQ3 701 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ALG1L2C9J202 215 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ZIC3O60481 467 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ZG16O60844 167 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 WDR1O75083 606 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 STX11O75558 287 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ANP32DO95626 131 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ACTL6AO96019 429 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 GSNP06396 782 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 GUSBP08236 651 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ZCCHC18P0CG32 403 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 RNF224P0DH78 156 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 BMP7P18075 431 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 AGAP20933 346 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ACVR2AP27037 513 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 MSX1P28360 303 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 MAGEA8P43361 318 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ANXA11P50995 505 aaKnown RBP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 SMSP52788 366 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ATP12AP54707 1039 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 CRYZQ08257 329 aaKnown RBP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 GANABQ14697 944 aaKnown RBP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 SF3B4Q15427 424 aaKnown RBP eCLIP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 KLHL26Q53HC5 615 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ATAD3BQ5T9A4 648 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 AP1ARQ63HQ0 302 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ZNF585AQ6P3V2 769 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 AAGABQ6PD74 315 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 XKRXQ6PP77 449 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 C3P1Q6ZMU1 363 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 MTERF4Q7Z6M4 381 aaKnown RBP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 GALNT10Q86SR1 603 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 YRDCQ86U90 279 aaKnown RBP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 PM20D2Q8IYS1 436 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 ZNF527Q8NB42 609 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 CHDHQ8NE62 594 aaPredicted RBP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 OR4K17Q8NGC6 315 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 OR9I1Q8NGQ6 314 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 RFWD2Q8NHY2 731 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 THOC1Q96FV9 657 aaKnown RBP9.72□□□□□ -0.85
LINC00239-201ENST00000556973 DMRTA2Q96SC8 542 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 OR2B2Q9GZK3 357 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 DSN1Q9H410 356 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 SERHL2Q9H4I8 314 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 RABEP2Q9H5N1 569 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 CCDC134Q9H6E4 229 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 MED11Q9P086 117 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 DCTN4Q9UJW0 460 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 MYO18BQ8IUG5 2567 aa9.72□□□□□ -0.85
LINC00239-201ENST00000556973 A0A0G2JND7 137 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 KRT75O95678 551 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 VIMP08670 466 aaKnown RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 OR12D1P0DN82 309 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 TROVE2P10155 538 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 CPN1P15169 458 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 NCF2P19878 526 aaPredicted RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 CHMP24386 653 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 DPP4P27487 766 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 PTGER4P35408 488 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 DCTP40126 519 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 MDH1P40925 334 aaKnown RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 CDKN2CP42773 168 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 CASP9P55211 416 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 RPS26P62854 115 aaKnown RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 ADORA2A-AS1P86434 159 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 GUCY1A3Q02108 690 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 STX5Q13190 355 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 SQLEQ14534 574 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 GLYR1Q49A26 553 aaPredicted RBP9.71□□□□□ -0.86
LINC00239-201ENST00000556973 FLYWCH1Q4VC44 716 aa9.71□□□□□ -0.86
LINC00239-201ENST00000556973 HEPHL1Q6MZM0 1159 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms